Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_K02
         (801 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   0.24 
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   7.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   7.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   7.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   7.6  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.2 bits (50), Expect(2) = 0.24
 Identities = 10/46 (21%), Positives = 25/46 (54%)
 Frame = -1

Query: 573 RHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIHNTFAF 436
           R G+ + +A     +  + +V++  +NI+++N   ++E     F+F
Sbjct: 27  RMGQSICMAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSF 72



 Score = 21.0 bits (42), Expect(2) = 0.24
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 417 SIVSDSNMHDKIT 379
           S +SD+N+H KIT
Sbjct: 105 SAISDTNVHLKIT 117


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 436 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 332
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 436 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 332
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 436 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 332
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 436 SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 332
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,857
Number of Sequences: 438
Number of extensions: 3408
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)