Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I24
         (924 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.97 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.97 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.7  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   3.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   3.0  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   3.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   9.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   9.0  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 132  VHPHSLLLYCFCLGHQASLQGTTTPP 209
            +HP++ LL+ F     A  +G  +PP
Sbjct: 1730 LHPNNTLLHSFMYHEHAMTEGCASPP 1755


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 132  VHPHSLLLYCFCLGHQASLQGTTTPP 209
            +HP++ LL+ F     A  +G  +PP
Sbjct: 1726 LHPNNTLLHSFMYHEHAMTEGCASPP 1751


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 550  SGGGVYKSDIYIGSSSD 500
            SGGG+Y  D  I SSS+
Sbjct: 1124 SGGGIYTKDTKITSSSE 1140


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -3

Query: 169 KQKQYRRRECGCTNISSEXELTNLLFKKMFCNN 71
           K+++  +     +++S+     N  +KK++CNN
Sbjct: 71  KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNN 103


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -3

Query: 169 KQKQYRRRECGCTNISSEXELTNLLFKKMFCNN 71
           K+++  +     +++S+     N  +KK++CNN
Sbjct: 71  KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNN 103


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -3

Query: 169 KQKQYRRRECGCTNISSEXELTNLLFKKMFCNN 71
           K+++  +     +++S+     N  +KK++CNN
Sbjct: 71  KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNN 103


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -1

Query: 264 WGLGVDRLTMFLTDSNNIKEVLLFPA 187
           WGLG+ +L  +++++++   VL   A
Sbjct: 102 WGLGICKLRAYVSETSSYVSVLTIVA 127


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 496 HNLRMIQYKCRIYTLLLQKYRNQFIQEP 579
           +N+   QY   +YT ++ +   +FIQ P
Sbjct: 133 NNINEAQYIYSLYTAVITRPDTKFIQLP 160


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 496 HNLRMIQYKCRIYTLLLQKYRNQFIQEP 579
           +N+   QY   +YT ++ +   +FIQ P
Sbjct: 133 NNINEAQYIYSLYTAVITRPDTKFIQLP 160


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 297 ALEYGLPPTGGWG 259
           AL   LPP  GWG
Sbjct: 26  ALSLSLPPLFGWG 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,334
Number of Sequences: 438
Number of extensions: 4857
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)