Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I23
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   1.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   2.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   8.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   8.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   8.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 443 LDKLDPSKITAFEKEFTQHIKTSHQGLLSTIA 348
           L KLD SK+TA  +E      T + G +  +A
Sbjct: 21  LSKLDVSKLTALSREVISRQATINIGTIGHVA 52


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
 Frame = +3

Query: 579  NRTGQKLRPHGTEPXQLHGXATAS*P----WSEQQIRXAIQ 689
            N    K+RPH T+   +HG      P    W   QI   +Q
Sbjct: 1380 NSLTMKVRPHPTDNAPIHGYTIHYKPEFGDWDTAQISSTVQ 1420


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = +3

Query: 204 TALQTRVLRSVTRQVT*TSLLRLGESS*EVCDDLLQGGVRLGGDLTVFGDRGEKTLVASF 383
           TA     L ++ RQ   T ++R G S      D L+        + +F +  E+TL+   
Sbjct: 181 TAATDCQLWAIDRQCFQTIMMRTGLSRQAEYTDFLKS-------VPIFKNLPEETLIKIS 233

Query: 384 DVLSEFLLEGSDF 422
           DVL E      D+
Sbjct: 234 DVLEETFYNNGDY 246


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 629 KLXWLSTVRSQLLPSSVLTW 570
           K+ WL      LLPS  L W
Sbjct: 243 KMSWLFESEDVLLPSVYLRW 262


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -2

Query: 581 VLTWMPXHSSCSTEECVLLSSSXQGQYVPMAIEEQVAIIYCGVRG 447
           +L+ +P H +    + +  S   Q + + M+  E V+I+Y  + G
Sbjct: 237 LLSVLPEHVAVKMRQDLGASLDTQFKKIYMSRHENVSILYADIVG 281


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 432 GPLQNHCLREGIHSTHQN*PPGS 364
           G L   C REGI  +  N  P S
Sbjct: 551 GTLYGRCKREGIELSRSNPTPWS 573


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = +1

Query: 352 IVERRPWW 375
           ++++RPWW
Sbjct: 70  VIDKRPWW 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,739
Number of Sequences: 438
Number of extensions: 3670
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)