Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_I16
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   2.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   4.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   4.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   4.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   7.5  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   9.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   9.9  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -1

Query: 559 NLCNG-ARILLRTVTAGHGVCGSREIRTKIGCLVGPRKLKRPRTNGTK 419
           N+C+   RILL +     G+C   E R       G  KL RP  N T+
Sbjct: 3   NICSRLGRILLISAVFCVGLCSEDEERLVRDLFRGYNKLIRPVQNMTE 50


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -3

Query: 503 MWLT*NSDQNWLLGWTKEVEATENEWNEGRNQTVKALEDAIEGEK 369
           +W   + DQ W+L W  + +           +TV+ +EDA + +K
Sbjct: 595 LWYVPSLDQVWILNWRNQKDIDV--------KTVQVIEDAAQKKK 631


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 46  TLLYINNVRFRSLPGQRSQVRDAAVQGLL 132
           +L Y+N  +FR+   Q++ +    VQ +L
Sbjct: 274 SLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 46  TLLYINNVRFRSLPGQRSQVRDAAVQGLL 132
           +L Y+N  +FR+   Q++ +    VQ +L
Sbjct: 274 SLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 46  TLLYINNVRFRSLPGQRSQVRDAAVQGLL 132
           +L Y+N  +FR+   Q++ +    VQ +L
Sbjct: 274 SLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 118 VQGLLLLVRSDRLGHVAHYPVDHVLLGETALHVRLLEL 231
           ++  LL   +DRLG +   P +       ++H++L +L
Sbjct: 252 IEKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKLPKL 289


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 408 LVPTFVPFVLGRFNFLGPTKQPILVRISREP 500
           LV TFV  V G  N L P  +P  +R   +P
Sbjct: 8   LVVTFVVAVFGNTN-LDPPTRPTRLRREAKP 37


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 408 LVPTFVPFVLGRFNFLGPTKQPILVRISREP 500
           LV TFV  V G  N L P  +P  +R   +P
Sbjct: 9   LVVTFVVAVFGNTN-LDPPTRPARLRREAKP 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,126
Number of Sequences: 438
Number of extensions: 4369
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)