Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H16
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    26   0.54 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   2.2  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   6.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 77  SILISNAAVCSSRFVLSAGVYWRVVR 154
           ++LI+   +CSS     A V+WR VR
Sbjct: 164 AVLIAIVWICSSAISFPAIVWWRAVR 189


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -2

Query: 184 YPTNRSLCYRPNNAPVY--SC*KNKSRRAHSSV 92
           YPTNRSL  R     +Y     ++K RRA   +
Sbjct: 131 YPTNRSLFIREQTEEMYREMLLEHKKRRARRDI 163


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 262 CAALGMPGGICCGGFCWFRGSLERTLGSGLYG 357
           C +LG  GG C  G C  R +  + L    +G
Sbjct: 64  CLSLGKAGGHCEKGVCICRKTSFKDLWDKRFG 95


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 383 RDPRLANAPPYNPDPRVRSSDP 318
           R+P LA A PYN    V S  P
Sbjct: 885 RNPALALAEPYNQRGTVVSPPP 906


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 383 RDPRLANAPPYNPDPRVRSSDP 318
           R+P LA A PYN    V S  P
Sbjct: 923 RNPALALAEPYNQRGTVVSPPP 944


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,423
Number of Sequences: 438
Number of extensions: 2934
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)