Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H10
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    38   9e-05
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    38   9e-05
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    30   0.031
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    29   0.054
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.2  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 651 NFEVHMYXHTGVKPLTCKLCDERFAYASTLRSHRMRCH 538
           + + HM  HTG KP  C  CD +F   + LR H +R H
Sbjct: 24  HLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRH-LRVH 60



 Score = 31.1 bits (67), Expect = 0.013
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 627 HTGVKPLTCKLCDERFAYASTLRSHRMRCH 538
           HTG KP  C  C +RF     L++H MR H
Sbjct: 4   HTGEKPFECPECHKRFTRDHHLKTH-MRLH 32



 Score = 29.1 bits (62), Expect = 0.054
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 654 ANFEVHMYXHTGVKPLTCKLC 592
           AN   H+  HTG +P  C+LC
Sbjct: 51  ANLRRHLRVHTGERPYACELC 71


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 645 EVHMYXHTGVKPLTCKLCDERFAYASTLRSHRMRCHPE 532
           +VH   HTG KP TC +C + F Y   L+ H++  + E
Sbjct: 220 KVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGE 257



 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -1

Query: 642 VHMYXHTGVKPLTCKLCDERFAYASTLRSHRMRCHPELMVPDGRAAYPAANYNHV 478
           +HM  HTG KP  CK C + F  +  L+ H  R H             +  YNHV
Sbjct: 193 IHMRTHTGEKPYVCKACGKGFTCSKQLKVH-TRTHTGEKPYTCDICGKSFGYNHV 246



 Score = 35.1 bits (77), Expect = 8e-04
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 657 KANFEVHMYXHTGVKPLTCKLCDERFAYASTLRSHRMRCH 538
           K N  VH   HT  +P  C +C+  F ++  L  H MR H
Sbjct: 132 KENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRH-MRIH 170



 Score = 31.9 bits (69), Expect = 0.008
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 639 HMYXHTGVKPLTCKLCDERFAYASTLRSHRMRCH 538
           H   HTG KP  C+ C + F+    L  HR R H
Sbjct: 110 HYRTHTGEKPYQCEYCSKSFSVKENLSVHR-RIH 142



 Score = 28.3 bits (60), Expect = 0.094
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 645 EVHMYXHTGVKPLTCKLCDERFAYASTLRSHRMRCHPELMV 523
           ++H   H G K   C LC E F    T+  H ++ H +  V
Sbjct: 248 KLHQVAHYGEKVYKCTLCHETFGSKKTMELH-IKTHSDSSV 287


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 29.9 bits (64), Expect = 0.031
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 657 KANFEVHMYXHTGVKPLTCKLCDERFAYASTLRSH 553
           K + E H+  H G KP  C+ C       S L SH
Sbjct: 1   KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSH 35


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 29.1 bits (62), Expect = 0.054
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 639 HMYXHTGVKPLTCKLCDERFA 577
           H+  HTG KP +C+ C+  FA
Sbjct: 61  HIRTHTGEKPFSCQHCNRAFA 81


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 92  NT*LNTGRYFN*INTLNEKKNEPQIFNTNWQFHTLTRN 205
           NT L     +  +N   EKK++   FN   +F +L ++
Sbjct: 435 NTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKS 472


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 92  NT*LNTGRYFN*INTLNEKKNEPQIFNTNWQFHTLTRN 205
           NT L     +  +N   EKK++   FN   +F +L ++
Sbjct: 435 NTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKS 472


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,447
Number of Sequences: 438
Number of extensions: 3730
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)