Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H09
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.61 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   7.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   10.0 

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 158 NSRLKYNFQERDLSERLVI 102
           N  LKY+ +ERDLS R+++
Sbjct: 509 NKSLKYSDKERDLSLRMIL 527


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 469 KFNVALNVRITEIIKMSRLLSKVAICAFGQKN 374
           KFNV L   +++ I   + +S + IC     N
Sbjct: 201 KFNVPLQPVVSDPIFDKKAMSDLVICKLSHSN 232


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 469 KFNVALNVRITEIIKMSRLLSKVAICAFGQKN 374
           KFNV L   +++ I   + +S + IC     N
Sbjct: 201 KFNVPLQPVVSDPIFDKKAMSDLVICKLSHSN 232


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -2

Query: 370 IDMSIQIDLNIIVSFKEYG 314
           +D+++ +DL+I  + +EYG
Sbjct: 676 VDVTLPLDLHIQNAIREYG 694


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 577 HAKYSVGN*EKKKKLALTSQPNSDQTSS 660
           H KY      K   LA  ++P+SD  S+
Sbjct: 335 HPKYRAALFAKFPSLACAAEPSSDAVST 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,123
Number of Sequences: 438
Number of extensions: 4158
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)