Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_H07
(775 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 3.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 7.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 7.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 7.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 7.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 7.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 7.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 7.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 7.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 7.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 7.3
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 12 FFLDRKLLYYS-STTSNQFTFISS*WNINRNL 104
FF++ K Y+ +TTSN+F I +I R++
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 130
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 12 FFLDRKLLYYS-STTSNQFTFISS*WNINRNL 104
FF++ K Y+ +TTSN+F I +I R++
Sbjct: 99 FFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 130
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 12 FFLDRKLLYYS-STTSNQFTFISS*WNINRNL 104
FF++ K Y+ +TTSN+F I +I R++
Sbjct: 38 FFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 69
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 380 KLHT*KENLKSQATSC 333
KLH KE L + TSC
Sbjct: 243 KLHNEKEKLLEERTSC 258
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,118
Number of Sequences: 438
Number of extensions: 4824
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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