Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_H04
         (865 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             235   5e-64
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.4  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  235 bits (574), Expect = 5e-64
 Identities = 114/133 (85%), Positives = 117/133 (87%)
 Frame = -2

Query: 777 EMATXASSXSLENFTXFPTVRSSPSETKRFRCPEALFQPSFLGMEACGIHETTYNSIMKC 598
           EMAT ASS SLE     P  +      +RFRCPEALFQPSFLGMEACGIHETTYNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 597 DVXIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 418
           DV IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSI
Sbjct: 61  DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSI 120

Query: 417 LASLSTFQQMWIS 379
           LASLSTFQQMWIS
Sbjct: 121 LASLSTFQQMWIS 133


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 659 EGWKRASGQRNLFVSDGDDLTVGXFVKFSRXLLDAXVAIS 778
           EG    +GQ NL+  D   L V      SR ++     I+
Sbjct: 5   EGLGVTTGQPNLYKQDLSKLDVSKLTALSREVISRQATIN 44


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 562 RIVRWYHHVPWNRRPYAK 509
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 562 RIVRWYHHVPWNRRPYAK 509
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 666 QPSFLGMEACGIHETTYNSIMKCDVXIRKDLYANTVL 556
           + +FLG+    +   +YN +   D  + KDL+   +L
Sbjct: 328 ETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQIL 364


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,409
Number of Sequences: 438
Number of extensions: 4600
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)