Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_G19
(787 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 277 1e-75
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 272 5e-74
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 107 2e-24
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 60 4e-10
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.14
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 29 1.00
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.3
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 2.3
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 27 2.3
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 27 4.0
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.3
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 9.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 9.3
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 9.3
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.3
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 277 bits (679), Expect = 1e-75
Identities = 132/195 (67%), Positives = 153/195 (78%), Gaps = 2/195 (1%)
Frame = -3
Query: 713 ALNVDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTHASSPP-NQMVK 540
+LNVDL EFQTNLV P H+ S + + S + T+ P NQMVK
Sbjct: 251 SLNVDLNEFQTNLV--PYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVK 308
Query: 539 CDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 360
CDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VP
Sbjct: 309 CDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVP 368
Query: 359 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 180
G +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED
Sbjct: 369 GSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARED 428
Query: 179 LAALEKDYEEVGMDS 135
LAALE+DYEEVG DS
Sbjct: 429 LAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 272 bits (666), Expect = 5e-74
Identities = 130/197 (65%), Positives = 152/197 (77%), Gaps = 2/197 (1%)
Frame = -3
Query: 719 DXALNVDLTEFQTNLVXTPVSTSHWSRTRQSSL-PRRPTMNSFPSPRSQTHASSPP-NQM 546
+ +LNVDL EFQTNLV P H+ + + + S + T+ P NQM
Sbjct: 245 EGSLNVDLAEFQTNLV--PYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQM 302
Query: 545 VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 366
VKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP
Sbjct: 303 VKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQH 362
Query: 365 VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 186
+ G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAR
Sbjct: 363 IEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAR 422
Query: 185 EDLAALEKDYEEVGMDS 135
EDLAALE+DYEEVG DS
Sbjct: 423 EDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 107 bits (257), Expect = 2e-24
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 5/196 (2%)
Frame = -3
Query: 710 LNVDLTEFQTNLVXTPVSTSHWSRTRQSSLPR--RPTMNSFPSPRSQTHASSPPNQMVKC 537
LN DL + N+V P H+ + L + + P N MV
Sbjct: 246 LNSDLRKLAVNMV--PFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAA 303
Query: 536 DPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 357
DPRHG+Y+ L+RG V K+V+ I +++TK + FV+W P + PP
Sbjct: 304 DPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK---- 359
Query: 356 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR--- 186
DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 360 -DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
Query: 185 EDLAALEKDYEEVGMD 138
DL + + Y+E G+D
Sbjct: 416 NDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 60.1 bits (139), Expect = 4e-10
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = -3
Query: 560 PPNQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 384
P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++
Sbjct: 302 PKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALS 361
Query: 383 YQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE- 207
+ P + ++ + ML+N T+IA + R ++D + + AF+ Y E + E
Sbjct: 362 KKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFED 416
Query: 206 --GEFSEAREDLAALEKDYE 153
EF +R+ +A L +YE
Sbjct: 417 DLNEFDSSRDVVADLINEYE 436
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 493 VVTSCPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 359
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 490 VTSCPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 356
V S P+ P +P PSV + V P + SV P PE
Sbjct: 541 VPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPE 585
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 28.7 bits (61), Expect = 1.00
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Frame = -3
Query: 680 NLVXTPVSTSHWSRTRQSSLPRRPTMNSF-----------PSPRSQTHASSPPNQMVKCD 534
N V + +S++S S+LP P + F PS + ++ S+ PNQ +K
Sbjct: 197 NFVKRDIDSSNFSNLDASALPISPPSDFFSVHSHNLPNAPPSIPANSNNSASPNQRIKAS 256
Query: 533 PRH 525
P+H
Sbjct: 257 PKH 259
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 289 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 116
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 115 EPKSTK 98
EP+ TK
Sbjct: 208 EPRFTK 213
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 532 PVMASTWLAVCCTVVTSC 479
P AS W AV CT V SC
Sbjct: 551 PTGASQWAAVACTSVVSC 568
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 725 EXDXALNVDLTEFQTNLVXTPVSTSHWSRTRQSSLPRRPTMNSF 594
E ALN+D T+F + L S SH + RQ++L N +
Sbjct: 426 EDSLALNIDTTQFPSYLSYHETSVSH-NTYRQNNLEELKNQNDY 468
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 476 WARRHHGTAYSKPCTCHDGG 535
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 457 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 371
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 594 SVAEITNACFEPAKPDGEMRPPSWQV 517
SV ++T ACFEP+ ++ P W +
Sbjct: 800 SVTKVTCACFEPSLDYVVVKIPRWDL 825
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 640 RDQWEVDTGVXTKLVWNSVRSTFRA 714
RDQW V T +VWN RA
Sbjct: 289 RDQWVVSTSSQKTIVWNLALPNDRA 313
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 632 QSSLPRRPTMNSFPSPRSQTHASSPP 555
+ SLPRRP+ +P S T ++ PP
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPP 763
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 460 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 365
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -1
Query: 538 ATPVMASTWLAVCCTVVTSCPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 371
+TPV ++ CT TS P T + S P +N +T S TS P
Sbjct: 437 STPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,049,165
Number of Sequences: 5004
Number of extensions: 65241
Number of successful extensions: 251
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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