Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_G02
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   1.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.5  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   9.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 277 FTRLTDIERTGNVAVIGILVKLRLCH*STDCFRYPFASGSYQIG 408
           FT L  +   GN  VI  ++  R     T+CF    A+    +G
Sbjct: 44  FTMLIIVTIVGNTLVIAAVITTRRLRSVTNCFVSSLAAADLLVG 87


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 658 GTYPVRTXQEVLPPSE 611
           GTYP    Q  LPP E
Sbjct: 478 GTYPTLLPQWCLPPRE 493


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 302 RSISVNLVKKKFQLIADFRPRNCHQWTGSSGECAFPNCI 186
           R ++ +L+  K Q+       NCH    + G C    CI
Sbjct: 17  RRVTCDLLSFKGQVNDSACAANCHSLGKAGGHCEKGVCI 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,923
Number of Sequences: 438
Number of extensions: 4875
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)