Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_F23
(909 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19554-1|CAA79613.2| 466|Homo sapiens intermediate filament pro... 32 2.5
X56134-1|CAA39600.1| 466|Homo sapiens protein ( Human mRNA for ... 32 2.5
M25246-1|AAA61282.1| 300|Homo sapiens VIM protein. 32 2.5
M14144-1|AAA61279.1| 466|Homo sapiens VIM protein. 32 2.5
BC066956-1|AAH66956.1| 466|Homo sapiens vimentin protein. 32 2.5
BC030573-1|AAH30573.1| 466|Homo sapiens vimentin protein. 32 2.5
BC000163-1|AAH00163.2| 466|Homo sapiens vimentin protein. 32 2.5
AL133415-6|CAB87963.1| 466|Homo sapiens vimentin protein. 32 2.5
AK222602-1|BAD96322.1| 466|Homo sapiens vimentin variant protein. 32 2.5
AK222507-1|BAD96227.1| 466|Homo sapiens vimentin variant protein. 32 2.5
AK097336-1|BAC05002.1| 454|Homo sapiens protein ( Homo sapiens ... 32 2.5
AK056766-1|BAB71275.1| 410|Homo sapiens protein ( Homo sapiens ... 32 2.5
AF328728-1|AAN09720.1| 466|Homo sapiens CTCL tumor antigen HD-C... 32 2.5
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 32 3.3
AK222482-1|BAD96202.1| 466|Homo sapiens vimentin variant protein. 32 3.3
AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens ... 32 3.3
AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens ... 32 3.3
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 32 3.3
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 32 3.3
BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein. 31 4.4
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 4.4
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 31 4.4
AL133415-7|CAI39486.1| 173|Homo sapiens vimentin protein. 31 5.8
AK093924-1|BAC04253.1| 228|Homo sapiens protein ( Homo sapiens ... 31 5.8
CR407690-1|CAG28618.1| 466|Homo sapiens VIM protein. 31 7.6
>Z19554-1|CAA79613.2| 466|Homo sapiens intermediate filament
protein protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>X56134-1|CAA39600.1| 466|Homo sapiens protein ( Human mRNA for
vimentin. ).
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>M25246-1|AAA61282.1| 300|Homo sapiens VIM protein.
Length = 300
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 21 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 79
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 80 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 111
>M14144-1|AAA61279.1| 466|Homo sapiens VIM protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>BC066956-1|AAH66956.1| 466|Homo sapiens vimentin protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>BC030573-1|AAH30573.1| 466|Homo sapiens vimentin protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>BC000163-1|AAH00163.2| 466|Homo sapiens vimentin protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>AL133415-6|CAB87963.1| 466|Homo sapiens vimentin protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>AK222602-1|BAD96322.1| 466|Homo sapiens vimentin variant protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>AK222507-1|BAD96227.1| 466|Homo sapiens vimentin variant protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>AK097336-1|BAC05002.1| 454|Homo sapiens protein ( Homo sapiens
cDNA FLJ40017 fis, clone STOMA2006330, highly similar to
VIMENTIN. ).
Length = 454
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 175 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 233
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 234 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 265
>AK056766-1|BAB71275.1| 410|Homo sapiens protein ( Homo sapiens
cDNA FLJ32204 fis, clone PLACE6003077, highly similar to
VIMENTIN. ).
Length = 410
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 166 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 224
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 225 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 256
>AF328728-1|AAN09720.1| 466|Homo sapiens CTCL tumor antigen
HD-CL-06 protein.
Length = 466
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -3
Query: 337 TSVAPQAAAANDTEPDTKTAQRKRKI---VTENAEEQNVGRAHKNEHVPKKI 191
T + PQA++++ T P T A KRK+ N E+ G + +++H K++
Sbjct: 2512 TQMPPQASSSHTTAPTTVAASLKRKLDDKEDNNCSEKEGGNSGEDQHRDKRL 2563
>AK222482-1|BAD96202.1| 466|Homo sapiens vimentin variant protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKMESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
>AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens
cDNA FLJ16624 fis, clone TESTI4015442, moderately
similar to Mus musculus zinc finger homeodomain 4
(Zfh4-pending). ).
Length = 1103
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -3
Query: 337 TSVAPQAAAANDTEPDTKTAQRKRKI---VTENAEEQNVGRAHKNEHVPKKI 191
T + PQA++++ T P T A KRK+ N E+ G + +++H K++
Sbjct: 44 TQMPPQASSSHTTAPTTVAASLKRKLDDKEDNNCSEKEGGNSGEDQHRDKRL 95
>AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens
cDNA FLJ16492 fis, clone CTONG2028758, highly similar
to Mus musculus zfh-4 mRNA for zinc-finger homeodomain
protein 4. ).
Length = 907
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -3
Query: 337 TSVAPQAAAANDTEPDTKTAQRKRKI---VTENAEEQNVGRAHKNEHVPKKI 191
T + PQA++++ T P T A KRK+ N E+ G + +++H K++
Sbjct: 248 TQMPPQASSSHTTAPTTVAASLKRKLDDKEDNNCSEKEGGNSGEDQHRDKRL 299
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -3
Query: 337 TSVAPQAAAANDTEPDTKTAQRKRKI---VTENAEEQNVGRAHKNEHVPKKI 191
T + PQA++++ T P T A KRK+ N E+ G + +++H K++
Sbjct: 2540 TQMPPQASSSHTTAPTTVAASLKRKLDDKEDNNCSEKEGGNSGEDQHRDKRL 2591
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -2
Query: 281 GPTETKNRH-RKRRGTKCRAGPQKRTCSEKNRCREKGGHRRLPIPERDLRQVLQRNQQY* 105
G ++RH RKR ++ R+G + R+ S ++ ++G RR +RD R+ R++
Sbjct: 25 GSMGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKR 84
Query: 104 ADKGQKVEETKRER 63
+ + + +R R
Sbjct: 85 RSRSRDRKRLRRSR 98
>BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein.
Length = 259
Score = 31.5 bits (68), Expect = 4.4
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 266 KNRH-RKRRGTKCRAGPQKRTCSEKNRCREKGGHRRLPIPERDLRQVLQRNQQY*ADKGQ 90
++RH RKR ++ R+G + R+ S ++ ++G RR +RD R+ R++ + +
Sbjct: 4 ESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSR 63
Query: 89 KVEETKRER 63
+ +R R
Sbjct: 64 DRKRLRRSR 72
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 31.5 bits (68), Expect = 4.4
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 266 KNRH-RKRRGTKCRAGPQKRTCSEKNRCREKGGHRRLPIPERDLRQVLQRNQQY*ADKGQ 90
++RH RKR ++ R+G + R+ S ++ ++G RR +RD R+ R++ + +
Sbjct: 4 ESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSR 63
Query: 89 KVEETKRER 63
+ +R R
Sbjct: 64 DRKRLRRSR 72
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 31.5 bits (68), Expect = 4.4
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 266 KNRH-RKRRGTKCRAGPQKRTCSEKNRCREKGGHRRLPIPERDLRQVLQRNQQY*ADKGQ 90
++RH RKR ++ R+G + R+ S ++ ++G RR +RD R+ R++ + +
Sbjct: 4 ESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSR 63
Query: 89 KVEETKRER 63
+ +R R
Sbjct: 64 DRKRLRRSR 72
>AL133415-7|CAI39486.1| 173|Homo sapiens vimentin protein.
Length = 173
Score = 31.1 bits (67), Expect = 5.8
Identities = 21/90 (23%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = -3
Query: 397 IEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNVGR 224
++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 15 LQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQA 73
Query: 223 AHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 74 QIQEQHVQIDVDVSKPDLTAALRDVRQQYE 103
>AK093924-1|BAC04253.1| 228|Homo sapiens protein ( Homo sapiens
cDNA FLJ36605 fis, clone TRACH2015316, highly similar to
VIMENTIN. ).
Length = 228
Score = 31.1 bits (67), Expect = 5.8
Identities = 21/90 (23%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = -3
Query: 397 IEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNVGR 224
++EE+LQ+ ++A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 7 LQEEMLQR-EEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQA 65
Query: 223 AHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 66 QIQEQHVQIDVDVSKPDLTAALRDVRQQYE 95
>CR407690-1|CAG28618.1| 466|Homo sapiens VIM protein.
Length = 466
Score = 30.7 bits (66), Expect = 7.6
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = -3
Query: 403 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE--QNV 230
E ++EE+LQ+ +A++ ++ + V + A D E ++ Q + + + EE Q +
Sbjct: 187 EKLQEEMLQR-GEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQEL 245
Query: 229 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYD 134
+ +HV +DV+K ++TA + Y+
Sbjct: 246 QAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,661,649
Number of Sequences: 237096
Number of extensions: 1529424
Number of successful extensions: 5714
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5685
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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