Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F21
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    35   8e-04
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 35.1 bits (77), Expect = 8e-04
 Identities = 21/64 (32%), Positives = 27/64 (42%)
 Frame = -3

Query: 506 EKQIIFNVNVVPACLYSGVNSKRIDPTRALALGWGYLGPRERLADVLQKVEVSEFTTEEC 327
           EK I F   V PACL           +    LGWG+      L+ +LQK  ++  T  EC
Sbjct: 264 EKDIKFGDKVGPACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVEC 323

Query: 326 LTQY 315
              Y
Sbjct: 324 YKYY 327



 Score = 27.1 bits (57), Expect = 0.21
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 238 DTCEGDSGGPLILHESEAGCARAVFGVTSSGVACGDAGAGLYTRVEPY 95
           D C+ DSGGP +L ++         G+ S G  CG    G  T+V  Y
Sbjct: 343 DACQMDSGGP-VLWQNPRTKRLVNIGIISWGAECGKYPNG-NTKVGSY 388


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 213 PPLSPSQVSCGVSRSPXAHLRAVVEPVEQVAVLRIL 320
           PPLSP   S   SRS  + +   V+P+    V   L
Sbjct: 441 PPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAAL 476



 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 154  TSRQTQPWRSLPRSRAGSRD 213
            + R T P   L  SRAGSRD
Sbjct: 1391 SDRLTSPPTPLSISRAGSRD 1410


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/24 (33%), Positives = 10/24 (41%)
 Frame = +3

Query: 120 PAPASPHATPDDVTPNTALAQPAS 191
           P P  P   P    P+  +  PAS
Sbjct: 46  PPPGGPPGAPPSQNPSQMMISPAS 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,702
Number of Sequences: 438
Number of extensions: 3912
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)