SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F19
         (1012 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        33   2.2  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     33   2.2  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    33   2.2  
BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein pr...    32   2.9  
BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.        32   2.9  
AF106062-1|AAD45972.1|  312|Homo sapiens Wiskott-Aldrich syndrom...    32   2.9  
AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.              32   2.9  
BC067776-1|AAH67776.1|  415|Homo sapiens neuromedin U receptor 2...    31   5.0  
BC016938-1|AAH16938.1|  415|Homo sapiens neuromedin U receptor 2...    31   5.0  
AF292402-1|AAG03064.1|  415|Homo sapiens neuromedin U receptor-t...    31   5.0  
AF272363-1|AAG24794.1|  415|Homo sapiens neuromedin U receptor 2...    31   5.0  
AF242874-1|AAF82755.1|  412|Homo sapiens neuromedin U receptor 2...    31   5.0  
AB041228-1|BAB13721.1|  412|Homo sapiens G protein-coupled recep...    31   5.0  
BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        31   8.8  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     31   8.8  

>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 32.7 bits (71), Expect = 2.2
 Identities = 18/66 (27%), Positives = 19/66 (28%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSXPTR 620
           PPPPP    PS          Q      +P PP      G  P    PP        P  
Sbjct: 125 PPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVP 184

Query: 621 QXPXSP 638
             P  P
Sbjct: 185 PPPPPP 190


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 32.7 bits (71), Expect = 2.2
 Identities = 18/66 (27%), Positives = 19/66 (28%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSXPTR 620
           PPPPP    PS          Q      +P PP      G  P    PP        P  
Sbjct: 543 PPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVP 602

Query: 621 QXPXSP 638
             P  P
Sbjct: 603 PPPPPP 608


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 32.7 bits (71), Expect = 2.2
 Identities = 18/66 (27%), Positives = 19/66 (28%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSXPTR 620
           PPPPP    PS          Q      +P PP      G  P    PP        P  
Sbjct: 434 PPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVP 493

Query: 621 QXPXSP 638
             P  P
Sbjct: 494 PPPPPP 499


>BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein
           protein.
          Length = 510

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 28/117 (23%), Positives = 32/117 (27%), Gaps = 5/117 (4%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSXP-- 614
           PPPPP    PS     VP           P  P R      +P    PP    P   P  
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP-RPSASSQAPPPPPPPSRPGPPPLPPS 324

Query: 615 ---TRQXPXSPDRXXTIXXSTXXSXXXPLQGSPXSEXQXAXPPXAXIPXEXSRTTXP 776
                + P  P R  ++  ST         G          PP    P   S    P
Sbjct: 325 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381


>BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.
          Length = 403

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 28/115 (24%), Positives = 33/115 (28%), Gaps = 6/115 (5%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSXP-- 614
           PPPPP    PS     VP           P  P R      +P    PP    P   P  
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP-RPSASSQAPPPPPPPSRPGPPPLPPS 324

Query: 615 ---TRQXPXSPDRXXTIXXSTXXSXXXPLQGS-PXSEXQXAXPPXAXIPXEXSRT 767
                + P  P R  ++  ST         G  P    +   PP    P     T
Sbjct: 325 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGMT 379


>AF106062-1|AAD45972.1|  312|Homo sapiens Wiskott-Aldrich syndrome
           protein interacting protein protein.
          Length = 312

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 28/117 (23%), Positives = 32/117 (27%), Gaps = 5/117 (4%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSXP-- 614
           PPPPP    PS     VP           P  P R      +P    PP    P   P  
Sbjct: 75  PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP-RPSASSQAPPPPPPPSRPGPPPLPPS 133

Query: 615 ---TRQXPXSPDRXXTIXXSTXXSXXXPLQGSPXSEXQXAXPPXAXIPXEXSRTTXP 776
                + P  P R  ++  ST         G          PP    P   S    P
Sbjct: 134 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 190


>AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.
          Length = 503

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 28/117 (23%), Positives = 32/117 (27%), Gaps = 5/117 (4%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXPXSXP-- 614
           PPPPP    PS     VP           P  P R      +P    PP    P   P  
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP-RPSASSQAPPPPPPPSRPGPPPLPPS 324

Query: 615 ---TRQXPXSPDRXXTIXXSTXXSXXXPLQGSPXSEXQXAXPPXAXIPXEXSRTTXP 776
                + P  P R  ++  ST         G          PP    P   S    P
Sbjct: 325 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381


>BC067776-1|AAH67776.1|  415|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 415

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 99  KNLTNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           K  TNYYLF+L + +++  +L + LE+     NY
Sbjct: 77  KTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNY 110


>BC016938-1|AAH16938.1|  415|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 415

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 99  KNLTNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           K  TNYYLF+L + +++  +L + LE+     NY
Sbjct: 77  KTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNY 110


>AF292402-1|AAG03064.1|  415|Homo sapiens neuromedin U receptor-type
           2 protein.
          Length = 415

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 99  KNLTNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           K  TNYYLF+L + +++  +L + LE+     NY
Sbjct: 77  KTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNY 110


>AF272363-1|AAG24794.1|  415|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 415

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 99  KNLTNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           K  TNYYLF+L + +++  +L + LE+     NY
Sbjct: 77  KTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNY 110


>AF242874-1|AAF82755.1|  412|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 412

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 99  KNLTNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           K  TNYYLF+L + +++  +L + LE+     NY
Sbjct: 74  KTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNY 107


>AB041228-1|BAB13721.1|  412|Homo sapiens G protein-coupled receptor
           TGR-1 protein.
          Length = 412

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 99  KNLTNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           K  TNYYLF+L + +++  +L + LE+     NY
Sbjct: 74  KTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNY 107


>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXP--XSXP 614
           PPPPP    PS      P  +        P PP         P     P    P   + P
Sbjct: 110 PPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAP 169

Query: 615 TRQXPXSPD 641
           + + P  PD
Sbjct: 170 SPEDPELPD 178


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
 Frame = +3

Query: 441 PPPPPXXXXPSXXSXXVPXXAQXXXXXXAPXPPIRXXXXGXSPXXXXPPXXXXP--XSXP 614
           PPPPP    PS      P  +        P PP         P     P    P   + P
Sbjct: 655 PPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAP 714

Query: 615 TRQXPXSPD 641
           + + P  PD
Sbjct: 715 SPEDPELPD 723


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,006,678
Number of Sequences: 237096
Number of extensions: 1038833
Number of successful extensions: 2405
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13544414870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -