Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_F19
         (1012 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    28   0.12 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    28   0.15 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   1.1  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 0.12
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 108 TNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           TNYYLF L + +++  IL +  E+S   + Y
Sbjct: 68  TNYYLFNLAVSDLLFLILGLPFELSVFWQQY 98


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 0.15
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 108 TNYYLFTLTIREVMCTILLIVLEISRCLENY 200
           TNYYLF+L I +++  +L +  E+S   + Y
Sbjct: 75  TNYYLFSLAISDLILLVLGLPNELSLFWQQY 105


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +3

Query: 81  VLIYFNKNL---TNYYLFTLTIREVMCTI 158
           V+I  NK++   TNYYLF+L + +++  I
Sbjct: 76  VVIARNKSMHTATNYYLFSLAVSDLLLLI 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,461
Number of Sequences: 438
Number of extensions: 2263
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33621042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)