Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_F12
(845 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 6.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 8.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 8.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 8.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 8.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 8.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 8.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 8.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 8.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 8.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 8.2
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 126 MLFFLLYWQISIY 88
MLF +LYW I ++
Sbjct: 375 MLFIILYWPILLF 387
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.2 bits (45), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 30 LYYSSTTSNQFTFIX*LMEYK*KFASTI 113
LYY STT N + ++Y+ F TI
Sbjct: 316 LYYFSTTINPILYNLMSIKYRNAFKQTI 343
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 21 KLHNEKEKLLEERTSC 36
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 254 KLHNEKEKLLEERTSC 269
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 378 KLHT*KENLKSQATSC 331
KLH KE L + TSC
Sbjct: 243 KLHNEKEKLLEERTSC 258
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,149
Number of Sequences: 438
Number of extensions: 4404
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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