Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_F02
(814 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ356012-1|ABC86955.1| 818|Homo sapiens ZNF438 transcript varia... 33 1.6
DQ356011-1|ABC86954.1| 818|Homo sapiens ZNF438 transcript varia... 33 1.6
BC104757-1|AAI04758.1| 828|Homo sapiens zinc finger protein 438... 33 1.6
BC101622-1|AAI01623.1| 828|Homo sapiens ZNF438 transcript varia... 33 1.6
AL359532-3|CAM17193.1| 828|Homo sapiens zinc finger protein 438... 33 1.6
AL359532-2|CAI13438.1| 818|Homo sapiens zinc finger protein 438... 33 1.6
AL359532-1|CAI13437.1| 392|Homo sapiens zinc finger protein 438... 33 1.6
AK131357-1|BAD18510.1| 779|Homo sapiens protein ( Homo sapiens ... 33 1.6
AF440405-1|AAP97319.1| 392|Homo sapiens unknown protein. 33 1.6
AF428258-1|AAP97298.1| 828|Homo sapiens hypothetical protein pr... 33 1.6
Y19205-1|CAC80724.1| 845|Homo sapiens SLITL1 protein. 31 5.0
BC113012-1|AAI13013.1| 845|Homo sapiens SLIT and NTRK-like fami... 31 5.0
BC113011-1|AAI13012.1| 845|Homo sapiens SLIT and NTRK-like fami... 31 5.0
AY358828-1|AAQ89187.1| 733|Homo sapiens LSGV9197 protein. 31 5.0
AL109653-2|CAC18888.1| 845|Homo sapiens SLIT and NTRK-like fami... 31 5.0
AL109653-1|CAI41645.1| 724|Homo sapiens SLIT and NTRK-like fami... 31 5.0
AK091015-1|BAC03566.1| 724|Homo sapiens protein ( Homo sapiens ... 31 5.0
AB058757-1|BAB47483.1| 572|Homo sapiens KIAA1854 protein protein. 31 5.0
>DQ356012-1|ABC86955.1| 818|Homo sapiens ZNF438 transcript variant
3 protein.
Length = 818
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 694 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 729
>DQ356011-1|ABC86954.1| 818|Homo sapiens ZNF438 transcript variant
2 protein.
Length = 818
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 694 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 729
>BC104757-1|AAI04758.1| 828|Homo sapiens zinc finger protein 438
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>BC101622-1|AAI01623.1| 828|Homo sapiens ZNF438 transcript variant
3 protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>AL359532-3|CAM17193.1| 828|Homo sapiens zinc finger protein 438
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>AL359532-2|CAI13438.1| 818|Homo sapiens zinc finger protein 438
protein.
Length = 818
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 694 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 729
>AL359532-1|CAI13437.1| 392|Homo sapiens zinc finger protein 438
protein.
Length = 392
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 268 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 303
>AK131357-1|BAD18510.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ16387 fis, clone TRACH2007483, weakly similar
to GASTRULA ZINC FINGER PROTEIN XLCGF7.1. ).
Length = 779
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 655 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 690
>AF440405-1|AAP97319.1| 392|Homo sapiens unknown protein.
Length = 392
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 268 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 303
>AF428258-1|AAP97298.1| 828|Homo sapiens hypothetical protein
protein.
Length = 828
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 448 HLQRGRAKDKHLK*EEWISHNCPKLRNLRHLHDSFTEL 561
H +RG+ + H EE SH CP+L+ HLH + E+
Sbjct: 704 HPERGKPEKVHSSSEE--SHACPRLKRQLHLHQNGVEM 739
>Y19205-1|CAC80724.1| 845|Homo sapiens SLITL1 protein.
Length = 845
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 300 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 345
>BC113012-1|AAI13013.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 300 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 345
>BC113011-1|AAI13012.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 300 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 345
>AY358828-1|AAQ89187.1| 733|Homo sapiens LSGV9197 protein.
Length = 733
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 300 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 345
>AL109653-2|CAC18888.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 300 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 345
>AL109653-1|CAI41645.1| 724|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 724
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 300 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 345
>AK091015-1|BAC03566.1| 724|Homo sapiens protein ( Homo sapiens
cDNA FLJ33696 fis, clone BRAWH2003964, weakly similar to
SLIT PROTEIN PRECURSOR. ).
Length = 724
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 300 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 345
>AB058757-1|BAB47483.1| 572|Homo sapiens KIAA1854 protein protein.
Length = 572
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 289 KRSRTPRRQERPCYRILATPDREPALKL*KRSLAAPLPLSCAWRSCV 149
K SR P+ + RP R+ + DR+ + +P+PL+C SCV
Sbjct: 306 KASRPPKMRNRPTPRVTVSKDRQSFGPIMVYQTKSPVPLTCP-SSCV 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,905,571
Number of Sequences: 237096
Number of extensions: 2239795
Number of successful extensions: 4849
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4849
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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