Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_D09
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose) polym... 33 1.6
AB041940-1|BAD83594.1| 307|Homo sapiens G-protein coupled recep... 31 3.6
BC005149-1|AAH05149.1| 580|Homo sapiens mucolipin 1 protein. 31 6.4
AK222673-1|BAD96393.1| 580|Homo sapiens mucolipin 1 variant pro... 31 6.4
AK026102-1|BAB15360.1| 580|Homo sapiens protein ( Homo sapiens ... 31 6.4
AJ293970-1|CAC08215.1| 580|Homo sapiens mucolipidin protein. 31 6.4
AJ293659-1|CAC07813.1| 545|Homo sapiens mucolipidin protein. 31 6.4
AF305579-1|AAG42242.1| 581|Homo sapiens mucolipin 1 protein. 31 6.4
AF287270-1|AAG00798.1| 580|Homo sapiens mucolipin protein. 31 6.4
AF287269-1|AAG00797.1| 580|Homo sapiens mucolipin protein. 31 6.4
AF249319-1|AAG10422.1| 580|Homo sapiens mucolipidosis type IV p... 31 6.4
BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose) polym... 30 8.4
AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens ... 30 8.4
>BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 323
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = -2
Query: 235 LVNSHLPPRSAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVF 92
LV S PP+S S ++W S F V I YLLL+ VSVI F
Sbjct: 269 LVYSQKPPKSRASSQ--LSWFSSHWFTVMISLYLLLLLIVSVINSSAF 314
>AB041940-1|BAD83594.1| 307|Homo sapiens G-protein coupled receptor
protein.
Length = 307
Score = 31.5 bits (68), Expect = 3.6
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = -2
Query: 208 SAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVFCCYCYVMYKYS 59
++ +C+ + WP S+ I+S LLLV + ++ +CY M++++
Sbjct: 2 NSTTCNSTLTWPASVNNFFIIYSALLLVLGL-LLNSVALWVFCYRMHQWT 50
>BC005149-1|AAH05149.1| 580|Homo sapiens mucolipin 1 protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 395 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 449
>AK222673-1|BAD96393.1| 580|Homo sapiens mucolipin 1 variant
protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 395 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 449
>AK026102-1|BAB15360.1| 580|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22449 fis, clone HRC09609. ).
Length = 580
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 395 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 449
>AJ293970-1|CAC08215.1| 580|Homo sapiens mucolipidin protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 395 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 449
>AJ293659-1|CAC07813.1| 545|Homo sapiens mucolipidin protein.
Length = 545
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 360 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 414
>AF305579-1|AAG42242.1| 581|Homo sapiens mucolipin 1 protein.
Length = 581
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 396 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 450
>AF287270-1|AAG00798.1| 580|Homo sapiens mucolipin protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 395 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 449
>AF287269-1|AAG00797.1| 580|Homo sapiens mucolipin protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 395 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 449
>AF249319-1|AAG10422.1| 580|Homo sapiens mucolipidosis type IV
protein protein.
Length = 580
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 187 IMAWPKSIRFIVAIHSYLLLVHSVSVIRKEV--FCCYCYVMY-KYSFFFTFIIKP 32
++ W IR++ H+Y +L+ ++ V V FCC V+Y Y F ++ P
Sbjct: 395 LLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGP 449
>BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 322
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = -2
Query: 235 LVNSHLPPRSAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVF 92
LV S PP+ A S ++W S F V I YLLL+ VSVI F
Sbjct: 269 LVYSQKPPKRAPSQ---LSWFSSHWFTVMISLYLLLLLIVSVINSSAF 313
>AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ20509 fis, clone KAT09623. ).
Length = 207
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = -2
Query: 235 LVNSHLPPRSAVSCHCIMAWPKSIRFIVAIHSYLLLVHSVSVIRKEVF 92
LV S PP+ A S ++W S F V I YLLL+ VSVI F
Sbjct: 154 LVYSQKPPKRASSQ---LSWFSSHWFTVMISLYLLLLLIVSVINSSAF 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,032,938
Number of Sequences: 237096
Number of extensions: 1567499
Number of successful extensions: 3092
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3091
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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