Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_D02
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.36 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.36 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   7.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 375 FIESCHRKTCLLFFIENVFKTFIIETSDH 289
           F+ SC +   +L+FI    +T++I  S +
Sbjct: 272 FVGSCRKTDQILYFIRGCLQTYLINASTY 300


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 375 FIESCHRKTCLLFFIENVFKTFIIETSDH 289
           F+ SC +   +L+FI    +T++I  S +
Sbjct: 310 FVGSCRKTDQILYFIRGCLQTYLINASTY 338


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 SLVSRECCRDGSCPVSAS 153
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 SLVSRECCRDGSCPVSAS 153
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 394 WVKIFFLYFL 423
           WVK+ FLY+L
Sbjct: 331 WVKVVFLYWL 340


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,617
Number of Sequences: 438
Number of extensions: 2777
Number of successful extensions: 65
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)