Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C17
         (813 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   4.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   4.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.4  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   7.8  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -3

Query: 682 TARGIDKLICQNRADQAFSM 623
           TAR ++KL+C   A++ +++
Sbjct: 101 TARSLEKLLCNVEAEENYNL 120


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 624 CVCLVKKEEEFLEFWR 577
           C   + KE+ FL +WR
Sbjct: 59  CFVRIPKEQGFLSYWR 74


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 624 CVCLVKKEEEFLEFWR 577
           C   + KE+ FL +WR
Sbjct: 59  CFVRIPKEQGFLSYWR 74


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 230 DCYYCIS 210
           DCYYCIS
Sbjct: 322 DCYYCIS 328


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 654 VKTVLIRPSVCVCL 613
           +KT+LI  ++C+C+
Sbjct: 1   MKTILIISAICICV 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,876
Number of Sequences: 438
Number of extensions: 4789
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)