Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_C09
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U07681-1|AAA85639.1| 366|Homo sapiens NAD(H)-specific isocitrat... 46 2e-04
BC021967-1|AAH21967.1| 366|Homo sapiens isocitrate dehydrogenas... 46 2e-04
AL442090-1|CAC09449.1| 288|Homo sapiens hypothetical protein pr... 46 2e-04
AK222973-1|BAD96693.1| 366|Homo sapiens isocitrate dehydrogenas... 46 2e-04
U49283-1|AAB94295.1| 385|Homo sapiens NAD+-specific isocitrate ... 36 0.22
BC001960-1|AAH01960.1| 385|Homo sapiens isocitrate dehydrogenas... 36 0.22
AL050094-1|CAB43266.1| 259|Homo sapiens hypothetical protein pr... 36 0.22
AL049712-1|CAC01442.2| 385|Homo sapiens isocitrate dehydrogenas... 36 0.22
AK001905-1|BAA91971.1| 233|Homo sapiens protein ( Homo sapiens ... 36 0.22
AF046929-1|AAF20164.1| 156|Homo sapiens NAD+-specific isocitrat... 36 0.22
AF023266-1|AAD09340.1| 387|Homo sapiens NAD+-specific isocitrat... 36 0.22
AL049712-2|CAC01443.1| 383|Homo sapiens isocitrate dehydrogenas... 32 2.1
AF023265-1|AAD09339.1| 383|Homo sapiens NAD+-specific isocitrat... 32 2.1
>U07681-1|AAA85639.1| 366|Homo sapiens NAD(H)-specific isocitrate
dehydrogenase alpha subunit precursor protein.
Length = 366
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -1
Query: 779 QIXAACFHXLREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
+I AACF +++GK LT+DLGG + C+DF + I + +K
Sbjct: 326 RIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVK 363
>BC021967-1|AAH21967.1| 366|Homo sapiens isocitrate dehydrogenase 3
(NAD+) alpha protein.
Length = 366
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -1
Query: 779 QIXAACFHXLREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
+I AACF +++GK LT+DLGG + C+DF + I + +K
Sbjct: 326 RIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVK 363
>AL442090-1|CAC09449.1| 288|Homo sapiens hypothetical protein
protein.
Length = 288
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -1
Query: 779 QIXAACFHXLREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
+I AACF +++GK LT+DLGG + C+DF + I + +K
Sbjct: 248 RIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVK 285
>AK222973-1|BAD96693.1| 366|Homo sapiens isocitrate dehydrogenase 3
(NAD+) alpha precursor variant protein.
Length = 366
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -1
Query: 779 QIXAACFHXLREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
+I AACF +++GK LT+DLGG + C+DF + I + +K
Sbjct: 326 RIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVK 363
>U49283-1|AAB94295.1| 385|Homo sapiens NAD+-specific isocitrate
dehydrogenase beta precursor protein.
Length = 385
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
++ GKV T+D+GG ST TDF K +I +L+
Sbjct: 353 IKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 381
>BC001960-1|AAH01960.1| 385|Homo sapiens isocitrate dehydrogenase 3
(NAD+) beta protein.
Length = 385
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
++ GKV T+D+GG ST TDF K +I +L+
Sbjct: 353 IKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 381
>AL050094-1|CAB43266.1| 259|Homo sapiens hypothetical protein
protein.
Length = 259
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
++ GKV T+D+GG ST TDF K +I +L+
Sbjct: 227 IKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 255
>AL049712-1|CAC01442.2| 385|Homo sapiens isocitrate dehydrogenase 3
(NAD+) beta protein.
Length = 385
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
++ GKV T+D+GG ST TDF K +I +L+
Sbjct: 353 IKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 381
>AK001905-1|BAA91971.1| 233|Homo sapiens protein ( Homo sapiens
cDNA FLJ11043 fis, clone PLACE1004437, highly similar to
Human NAD+-specific isocitrate dehydrogenase beta
subunit ).
Length = 233
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
++ GKV T+D+GG ST TDF K +I +L+
Sbjct: 201 IKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 229
>AF046929-1|AAF20164.1| 156|Homo sapiens NAD+-specific isocitrate
dehydrogenase b subunit protein.
Length = 156
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
++ GKV T+D+GG ST TDF K +I +L+
Sbjct: 124 IKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 152
>AF023266-1|AAD09340.1| 387|Homo sapiens NAD+-specific isocitrate
dehydrogenase beta subunit isoform B protein.
Length = 387
Score = 35.5 bits (78), Expect = 0.22
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNLK 666
++ GKV T+D+GG ST TDF K +I +L+
Sbjct: 353 IKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 381
>AL049712-2|CAC01443.1| 383|Homo sapiens isocitrate dehydrogenase 3
(NAD+) beta protein.
Length = 383
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNL 669
++ GKV T D+GG +TC DF + +I L
Sbjct: 353 IKVGKVRTSDMGGYATCHDFTEAVIAAL 380
>AF023265-1|AAD09339.1| 383|Homo sapiens NAD+-specific isocitrate
dehydrogenase beta subunit isoform A protein.
Length = 383
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 752 LREGKVLTQDLGGKSTCTDFXKXIIKNL 669
++ GKV T D+GG +TC DF + +I L
Sbjct: 353 IKVGKVRTSDMGGYATCHDFTEAVIAAL 380
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,613,637
Number of Sequences: 237096
Number of extensions: 1843521
Number of successful extensions: 3583
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3565
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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