Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C04
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.1  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   8.1  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 216 TKDSS*RPTIPELSSWPEISRLR 284
           T+DSS + TI  LSS  +I+R R
Sbjct: 91  TEDSSRKQTIDPLSSNTQITRKR 113


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 515 VQELRIWCRMRAPAETT 465
           ++  R W R R PA+TT
Sbjct: 162 IKRKRSWSRPREPAQTT 178


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 515 VQELRIWCRMRAPAETT 465
           ++  R W R R PA+TT
Sbjct: 40  IKRKRWWSRPREPAQTT 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,180
Number of Sequences: 438
Number of extensions: 3675
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)