Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C03
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             106   3e-25
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.4  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  106 bits (254), Expect = 3e-25
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -2

Query: 498 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 346
           GIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSILASLSTFQQMWIS
Sbjct: 83  GIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133



 Score = 75.8 bits (178), Expect = 5e-16
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 698 LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 600
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGI
Sbjct: 17  LPDGQVITIGNERFRCPEALFQPSFLGMEACGI 49



 Score = 75.4 bits (177), Expect = 6e-16
 Identities = 42/82 (51%), Positives = 46/82 (56%)
 Frame = -1

Query: 745 EMXXXXXXXSLEKSYDFPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASXETTYNSIMKC 566
           EM       SLEKSY+ P  +      +          P     +     ETTYNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 565 DVDIRKDLYANTVLSGGTTMYP 500
           DVDIRKDLYANTVLSGGTTMYP
Sbjct: 61  DVDIRKDLYANTVLSGGTTMYP 82


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 544 LYANTVLSGGTTMYPWNRRPYAKGNHSSRPIDNE 443
           L +N +L     ++ W R  Y + NH S  +D E
Sbjct: 46  LISNDILPVCNGLWRWIRLTYGQTNHISLTLDLE 79


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 544 LYANTVLSGGTTMYPWNRRPYAKGNHSSRPIDNE 443
           L +N +L     ++ W R  Y + NH S  +D E
Sbjct: 84  LISNDILPVCNGLWRWIRLTYGQTNHISLTLDLE 117


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/64 (18%), Positives = 26/64 (40%)
 Frame = -1

Query: 547 DLYANTVLSGGTTMYPWNRRPYAKGNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPLY 368
           D+++  + +    +Y W    Y  G+   R    +  D+  +   +L  D+W D    + 
Sbjct: 19  DIHSRNLTNSLKVIYEWKYIDYDFGSDEKRQAAIQSGDYNYTMNYLLDTDQWGDKTFVII 78

Query: 367 LPTN 356
           +  N
Sbjct: 79  MKFN 82


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +1

Query: 556 CPRRTS*WSYMWSRWMPQASIPKNEGWKRASGQRNLSFPMVMT 684
           CP +   +    S+ + Q  IP +      +G+RN+  P+V +
Sbjct: 150 CPSQIVVFDLKNSKLLKQVKIPHDIAINSTTGKRNVVTPIVQS 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,425
Number of Sequences: 438
Number of extensions: 4605
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)