Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_C01
         (892 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092627-1|BAC03928.1|  235|Homo sapiens protein ( Homo sapiens ...    34   0.60 
U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.                   31   5.6  
BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.         31   5.6  
BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3...    31   5.6  
BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3...    31   5.6  
AL953897-7|CAI15882.1|  615|Homo sapiens chromosome 1 open readi...    30   9.8  
AL953897-6|CAI15881.1|  827|Homo sapiens chromosome 1 open readi...    30   9.8  

>AK092627-1|BAC03928.1|  235|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35308 fis, clone PROST2009909, weakly similar to
           ADAM 12 PRECURSOR (EC 3.4.24.-). ).
          Length = 235

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +1

Query: 550 PNGHSCFLCEIVIRPXXXXXVRRLDRSRCLLWRSKQRGWRLQADLTVH 693
           P G  C  C   +RP     +  L R  C +W +   GW+ Q   T H
Sbjct: 145 PGGELCGRCSWKLRPGQRGPLPALCREGCPVWEAAVPGWKAQPARTAH 192


>U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.
          Length = 870

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 23/74 (31%), Positives = 29/74 (39%)
 Frame = +2

Query: 32  VSFGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 211
           +S  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 212 HGFGQCVEQRPLVP 253
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.
          Length = 870

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 23/74 (31%), Positives = 29/74 (39%)
 Frame = +2

Query: 32  VSFGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 211
           +S  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 212 HGFGQCVEQRPLVP 253
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 870

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 23/74 (31%), Positives = 29/74 (39%)
 Frame = +2

Query: 32  VSFGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 211
           +S  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 212 HGFGQCVEQRPLVP 253
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 335

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 23/74 (31%), Positives = 29/74 (39%)
 Frame = +2

Query: 32  VSFGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 211
           +S  P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 212 HGFGQCVEQRPLVP 253
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>AL953897-7|CAI15882.1|  615|Homo sapiens chromosome 1 open reading
           frame 167 protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 613 RRLDRSRCLLWRSKQRGWRLQADLTVH 693
           +RL +SR + W +++RGWRL  D   H
Sbjct: 87  QRLLQSRLVEWWAQERGWRLARDALCH 113


>AL953897-6|CAI15881.1|  827|Homo sapiens chromosome 1 open reading
           frame 167 protein.
          Length = 827

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 613 RRLDRSRCLLWRSKQRGWRLQADLTVH 693
           +RL +SR + W +++RGWRL  D   H
Sbjct: 304 QRLLQSRLVEWWAQERGWRLARDALCH 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,826,428
Number of Sequences: 237096
Number of extensions: 2505657
Number of successful extensions: 4769
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4769
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)