Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P23
         (972 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   5.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   5.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   9.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +3

Query: 438 GSEQQSICCVTAPQSTAVTTTPRPKRVHACQSEMTATPP 554
           G+   +I  +T   +T  TTT      +  Q+    TPP
Sbjct: 652 GAPATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPP 690


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 94  FGHSSWLFWRSRPKVLLHNHAGHRTDL 174
           FG S+W +   R    LH  A  + DL
Sbjct: 168 FGGSAWSWREERQAYYLHQFAPEQPDL 194


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 444 EQQSICCVTAPQSTAVTTTPRPKRVHACQSEMTATPPNP 560
           ++Q I    + Q ++    P+P    + Q+    +PPNP
Sbjct: 4   QKQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRGSPPNP 42


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 94  FGHSSWLFWRSRPKVLLHNHAGHRTDL 174
           FG S+W +   R    LH  A  + DL
Sbjct: 168 FGGSAWSWREERQAYYLHQFAPEQPDL 194


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 489 VTTTPRPKRVHACQSEM 539
           V +T RP R ++C+S+M
Sbjct: 398 VGSTRRPSRRNSCESQM 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,092
Number of Sequences: 438
Number of extensions: 4822
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32048835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)