Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P13
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.91 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   8.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 109 IDSARHKQIPKHHDYVLNEEYLASQKNRAKLITRIRP 219
           +  A +K   +H D+ + E Y AS  N   L   I P
Sbjct: 23  VSVAGYKHSRRHRDFTVAESYDASSSNSDSLSMTIPP 59


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 353 FSKLYPRLNRTSAVPMSRSTSLFEGLTILTTFD 255
           F K    +NR  +VP S      E ++ LT+ +
Sbjct: 696 FKKALELMNRAVSVPQSHQPGAMEQVSYLTSLE 728


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 118 ARHKQIPKHHDYVLNEEYLASQKNRAKLITRIRPD 222
           A H ++P   +   N+E L +   +A +I  IRP+
Sbjct: 788 AGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRPE 822


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 118 ARHKQIPKHHDYVLNEEYLASQKNRAKLITRIRPD 222
           A H ++P   +   N+E L +   +A +I  IRP+
Sbjct: 826 AGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRPE 860


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 257 DSKITLSATTGSSGLILVMSLALF 186
           D  +  SAT G+SG+  ++++ LF
Sbjct: 335 DDPVGASATHGASGIWGIIAIGLF 358


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 125 TNKSRNITITF*TKS 169
           TN+ RNI  TF TKS
Sbjct: 441 TNQQRNILNTFWTKS 455


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,987
Number of Sequences: 438
Number of extensions: 3875
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)