Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P02
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    25   0.90 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   8.4  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   8.4  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   8.4  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 80  ACPVDPSSCAPSLTTGKTSIS 18
           AC  +PSS A S T+G T+++
Sbjct: 350 ACAAEPSSDAVSTTSGTTTVT 370


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 111 FRSTLVT*LGSLSCGSIIVCSFAHYRQDKYIVESYP 4
           FR+T+VT    L   S I C  A++ ++  + + YP
Sbjct: 2   FRATIVTVACLLLAASPIDCVDANWYKNALVYQIYP 37


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +2

Query: 326 PVRDENDCDTRAYIKDDSVKIVTLMSAPIIPNSA-RDITRIVN 451
           P+R  +DC T + +  D   +V L       +S  R +  IV+
Sbjct: 419 PIRKISDCSTTSSLSGDESDVVELQPVKSSKSSGWRKLRNIVH 461


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 382 QNSDAH-ERAHHSEQRQRHYEN 444
           QN++ H ++AHHS +    + N
Sbjct: 441 QNNNQHNDQAHHSSKSNNRHNN 462


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 666 SPVDTHLKSRSIRSCLLRKATCESII 589
           S  D HLKS  +  C  +  T + I+
Sbjct: 108 SDADIHLKSSKLIKCFAKYKTLKEIM 133


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 611 FLNKQLLMDLLFKCVSTGDYDKAVTITKSLQ 703
           FLN+  +  L+ +C +  D +  + ITK  Q
Sbjct: 91  FLNENEINQLITECSAISDTNVHLKITKIFQ 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,809
Number of Sequences: 438
Number of extensions: 4808
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)