Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_N02
(839 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 28 0.093
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 27 0.22
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 26 0.38
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 26 0.50
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 26 0.50
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 26 0.50
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 25 0.66
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 25 0.87
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 2.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 4.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.6
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 4.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 4.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 4.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 4.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 8.1
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 28.3 bits (60), Expect = 0.093
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Frame = +1
Query: 319 IKDTRPRKAPNNPKLEEAYRQCPKP---KQFSTIAKK------LDLTERQVERWWRLRRS 471
++ +P + P P + K KQ+ TIA++ L LTE QV+ W++ RR+
Sbjct: 3 LRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWFQNRRA 62
Query: 472 QEK 480
+ K
Sbjct: 63 KAK 65
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 27.1 bits (57), Expect = 0.22
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEKPSTLTK 498
IA L LTERQ++ W++ RR + K +K
Sbjct: 303 IAHALCLTERQIKIWFQNRRMKWKKENKSK 332
Score = 21.8 bits (44), Expect = 8.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 312 LRHKGYETTESAK*SKVGGSIPTMSETQTVLHNSQEAG 425
LR+ G E + G ++ +TQ+V SQ+AG
Sbjct: 13 LRNGGVEHPHQHQ-QHYGAAVQVPQQTQSVQQQSQQAG 49
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 26.2 bits (55), Expect = 0.38
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +1
Query: 304 GKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFST-----IAKKLDLTERQVERWWRLRR 468
GK+ ++ RPR A + +L R+ + + + +++ L LTE Q++ W++ +R
Sbjct: 13 GKNGSPEEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNKR 72
Query: 469 SQEKPST 489
++ K ++
Sbjct: 73 AKIKKAS 79
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
IA L LTERQ++ W++ RR + K
Sbjct: 41 IAHALCLTERQIKIWFQNRRMKLK 64
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
IA L LTERQ++ W++ RR + K
Sbjct: 41 IAHALCLTERQIKIWFQNRRMKWK 64
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 25.8 bits (54), Expect = 0.50
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
IA L LTERQ++ W++ RR + K
Sbjct: 41 IAHALCLTERQIKIWFQNRRMKWK 64
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
+A L LT+ QV+ W++ RRS+ K
Sbjct: 14 LAASLGLTQTQVKIWFQNRRSKYK 37
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 25.0 bits (52), Expect = 0.87
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
+A L LTE QV+ W++ RR++ K
Sbjct: 41 LALSLSLTETQVKIWFQNRRTKWK 64
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 149 QTPSSQNLSNISRSILIVSKQALLFIQVCFNEKFNQENEH 30
Q SQ++ N +VSK +LF+ + N NEH
Sbjct: 297 QYEGSQDILNTQSFGKVVSKNGVLFLGLVGNSGIACVNEH 336
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT ++V +
Sbjct: 74 LMYNSADEGFDGTYQTSVVVT 94
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT ++V +
Sbjct: 74 LMYNSADEGFDGTYQTSVVVT 94
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT ++V +
Sbjct: 74 LMYNSADEGFDGTYQTSVVVT 94
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT ++V +
Sbjct: 74 LMYNSADEGFDGTYQTSVVVT 94
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT ++V +
Sbjct: 74 LMYNSADEGFDGTYQTSVVVT 94
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT ++V +
Sbjct: 74 LMYNSADEGFDGTYQTSVVVT 94
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 134 QNLSNISRSILIVSKQALLFIQVCFNEKFNQENEH 30
QN+ + S +VSK +LF + + NEH
Sbjct: 299 QNILDTQSSAKVVSKSGVLFFGLVGDSALGCWNEH 333
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT +V +
Sbjct: 142 LMYNSADEGFDGTYQTNVVVT 162
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 399 VLHNSQEAGFDGTASGTLVAS 461
+++NS + GFDGT +V +
Sbjct: 142 LMYNSADEGFDGTYQTNVVVT 162
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 4.6
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 657 YHVVPPHVAGHTL 619
Y+++PPHVA + L
Sbjct: 758 YNILPPHVAAYFL 770
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 134 QNLSNISRSILIVSKQALLFIQVCFNEKFNQENEH 30
QN+ + S +VSK +LF + + NEH
Sbjct: 299 QNILDTQSSAKVVSKSGVLFFGLVGDSALGCWNEH 333
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 134 QNLSNISRSILIVSKQALLFIQVCFNEKFNQENEH 30
QN+ + S +VSK +LF + + NEH
Sbjct: 299 QNILDTQSSAKVVSKSGVLFFGLVGDSALGCWNEH 333
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 149 QTPSSQNLSNISRSILIVSKQALLFIQVCFNEKFNQENEH 30
Q S+++ N VSK +LF+ + N NEH
Sbjct: 292 QYQGSEDILNTQSLAKAVSKNGVLFVGLVGNSAVGCWNEH 331
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 302 KGAYQCFSRKFRITIKTTA 246
KG YQCF R + + + TA
Sbjct: 365 KGMYQCFVRNDQESAQATA 383
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 399 VLHNSQEAGFDGT 437
+++NS + GFDGT
Sbjct: 111 LMYNSADEGFDGT 123
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,811
Number of Sequences: 438
Number of extensions: 5176
Number of successful extensions: 29
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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