Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_M07
(816 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 34 0.001
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 34 0.002
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.039
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.63
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 23 2.6
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 23 2.6
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 3.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 5.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.8
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.001
Identities = 32/103 (31%), Positives = 51/103 (49%)
Frame = +2
Query: 110 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 289
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 290 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF 418
+ + E + + I + ++ K + + +ID+PGH DF
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDF 98
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.002
Identities = 32/103 (31%), Positives = 51/103 (49%)
Frame = +2
Query: 110 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 289
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 290 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF 418
+ + E + + I + ++ K + + +ID+PGH DF
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAK-YYVTIIDAPGHRDF 98
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 0.039
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 137 MSVIAHVDHGKSTLTDSL 190
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
Score = 27.5 bits (58), Expect = 0.16
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +2
Query: 368 EKGFLINLIDSPGHVDFSSEVTAALRVTXXXXXXXXXXXXXXXQTETVLRQAIAERIKPI 547
E G + +D+PGH F S +T QT + A ++ I
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 548 LFMNKMDR 571
+ +NK+D+
Sbjct: 250 VAINKIDK 257
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.63
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 134 NMSVIAHVDHGKSTLTDSL 190
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 23.4 bits (48), Expect = 2.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 377 FLINLIDSPGHVDF 418
+ + +ID+PGH DF
Sbjct: 12 YYVTIIDAPGHRDF 25
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 23.4 bits (48), Expect = 2.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 377 FLINLIDSPGHVDF 418
+ + +ID+PGH DF
Sbjct: 28 YYVTIIDAPGHRDF 41
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 497 VHTHQTHSQQPQGIHQ*HGVQLLLQ 423
+HT H Q QG HQ Q LQ
Sbjct: 172 MHTQHPHMQPQQGQHQSQAQQQHLQ 196
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 5.9
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 115 VHHPTDLVYREIHH 74
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.9
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 517 TQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREINVSR*VNQV 386
T C S Y +RH N + + CS RE R +Q+
Sbjct: 227 TSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQL 270
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 296 ISMFFELEEKDLVFITNPDQREKSEKGFLI 385
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 296 ISMFFELEEKDLVFITNPDQREKSEKGFLI 385
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,463
Number of Sequences: 438
Number of extensions: 4387
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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