Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H10
         (842 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.38 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.38 
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   3.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.2  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    22   6.2  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   6.2  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   8.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -1

Query: 122 FPEMRNSFYFTLYTKLL-EYFI*RL 51
           FP++R  FYF L+ ++L  Y++ RL
Sbjct: 250 FPQIRGEFYFFLHKQVLNRYYLERL 274


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -1

Query: 122 FPEMRNSFYFTLYTKLL-EYFI*RL 51
           FP++R  FYF L+ ++L  Y++ RL
Sbjct: 250 FPQIRGEFYFFLHKQVLNRYYLERL 274


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
 Frame = +3

Query: 117 RKLLCFL--NY-YLFS*YKISYTS--KKLPYKNFAVSV 215
           RK++  L  NY Y  + YK +Y +  KKL YKN+ +++
Sbjct: 312 RKIISSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIINI 349


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 494 LDEKKDDILLTVTDVHIKSEVKDENADYT 580
           + E K+D+LL+  DV++       N   T
Sbjct: 363 IQEMKNDVLLSNNDVYLYQNTMSNNNQRT 391


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 494 LDEKKDDILLTVTDVHIKSEVKDENADYT 580
           + E K+D+LL+  DV++       N   T
Sbjct: 401 IQEMKNDVLLSNNDVYLYQNTMSNNNQRT 429


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +2

Query: 242 IKDLCRLCATQDEFSKDLLD 301
           IK+L ++C+ +++  K+LLD
Sbjct: 36  IKNLRKVCSKKNDTPKELLD 55


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +2

Query: 242 IKDLCRLCATQDEFSKDLLD 301
           IK+L ++C+ +++  K+LLD
Sbjct: 10  IKNLRKVCSKKNDTPKELLD 29


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -1

Query: 233 SSFNNYDRHCKVFVRKLFGSVAY 165
           S++NNY+ +   + +KL+ ++ Y
Sbjct: 92  SNYNNYNNNYNNYNKKLYYNINY 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,395
Number of Sequences: 438
Number of extensions: 3805
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)