Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_H09
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    27   0.22 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    24   2.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.7  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    23   4.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 149 PVGKGYRSLNLALRKEFDLYANVRPCKSLEGIK 247
           PV + Y+SLNLA +K  + Y++    KSL  +K
Sbjct: 445 PVNENYKSLNLAAQKR-EYYSHYVAFKSLSYLK 476


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 674 PEGVRPSPPTSPEHMSDMMSPYRLGIXQHVKL 579
           P+    + PTSP H+SD  +   +G+   V L
Sbjct: 251 PKPQTKTKPTSPYHVSDHKAAITVGVIMGVFL 282


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 346 HQADHGGGQYESGGVR 393
           HQ DHG G    GG R
Sbjct: 96  HQQDHGSGMDGMGGYR 111


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 355 DHGGGQYESGGVRLPVRQRKQEEEG 429
           DH   +  +GG R P+R++++ E G
Sbjct: 6   DHWHKRRATGGKRKPIRKKRKFELG 30


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 80  GIPQKAIDTVNANKIGLKGPLMTP 151
           G+P      V +NKIG  GPL+ P
Sbjct: 86  GVPSSL--NVISNKIGNGGPLLEP 107


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 616 HRTGWASXSTSNLEGVLHH-VEADRVQVSLFKLDVRVLGG 500
           H   +   +++++  VL   V+   V    +K+DV V+GG
Sbjct: 102 HSAAYRCVASNSVGRVLSRDVQVRAVVAQAYKVDVEVIGG 141


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 616 HRTGWASXSTSNLEGVLHH-VEADRVQVSLFKLDVRVLGG 500
           H   +   +++++  VL   V+   V    +K+DV V+GG
Sbjct: 102 HSAAYRCVASNSVGRVLSRDVQVRAVVAQAYKVDVEVIGG 141


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,761
Number of Sequences: 438
Number of extensions: 4652
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)