Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_G02
         (826 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   4.5  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   4.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   4.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.0  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   6.0  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   7.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.9  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 310 KNNATGIYKANSKHERNLIGYR 245
           K +A GIY +NS     + GY+
Sbjct: 265 KRDAAGIYGSNSSTVGTIFGYQ 286


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 310 KNNATGIYKANSKHERNLIGYR 245
           K +A GIY +NS     + GY+
Sbjct: 265 KRDAAGIYGSNSSTVGTIFGYQ 286


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 226 NMPIKGHAADVR*WSDLKYNHGSNYRNDTNAKSDDTIRT 110
           +M  + + A VR + D+  NH S  RND +   +    T
Sbjct: 99  DMVARCNKAGVRIYVDVIMNHMSGDRNDAHGTGNSRANT 137


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 249 IDKIKHDVICQSKDTLQM 196
           +D+   DV+ +++DTLQM
Sbjct: 334 LDRQNIDVVARNEDTLQM 351


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 390 FHATHPLHHTILVPNRL 340
           ++  H   HTI VPN+L
Sbjct: 125 YNGKHSYVHTITVPNKL 141


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 203 SVSFDWHITSCL 238
           SV FDW   SCL
Sbjct: 393 SVEFDWCAVSCL 404


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 527 CVTLHLINRYVYLNVVFT 580
           C+  +LIN   YLN V T
Sbjct: 289 CLQTYLINASTYLNEVHT 306


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 527 CVTLHLINRYVYLNVVFT 580
           C+  +LIN   YLN V T
Sbjct: 327 CLQTYLINASTYLNEVHT 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,122
Number of Sequences: 438
Number of extensions: 3710
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)