Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_D18
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    36   0.002
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   2.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   2.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.7  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +2

Query: 347 IPYPVEKKIPYPVKVHVPQPYP 412
           +P+PV   +P+ VKV++PQPYP
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYP 199



 Score = 28.7 bits (61), Expect = 0.23
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 6/27 (22%)
 Frame = +2

Query: 350 PYPVEKKIPYPV------KVHVPQPYP 412
           PYP+E + P+PV      +V VP+PYP
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYP 257



 Score = 26.6 bits (56), Expect = 0.95
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 347 IPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 436
           +PY VEK  PYP++V  P P    +   +P
Sbjct: 224 VPYTVEK--PYPIEVEKPFPVEVLKKFEVP 251



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 350 PYPVEKKIPYPVKVHVPQPYPXCQTCPLP 436
           PYP++  +  P+K+ + +  P     P+P
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVP 225



 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
 Frame = +2

Query: 347 IPYPVEKKIPY----PVKVHVPQPYP 412
           IP  +EK +PY    P  + V +P+P
Sbjct: 216 IPKVIEKPVPYTVEKPYPIEVEKPFP 241


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 554 HIYLDGDGSVEWDMYWVRHLLFDWV 480
           +I+L  DGS+ W    VR LLF+ V
Sbjct: 78  NIFLKTDGSLLWKNKPVRELLFEGV 102


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 482 PSRKEGALPSTCPTRQTRPRQGICARTLPRLKRKFMFQS 598
           P+R+     ST PT   R R     + LPR +R F F S
Sbjct: 275 PARRRSR--STRPTSWPRSRPTSKPKRLPRRRRPFFFSS 311


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 356 PVEKKIPYPVKVHVPQPYP 412
           PV   +PYP+ + +P P P
Sbjct: 625 PVTILVPYPIIIPLPLPIP 643



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 347 IPYPVEKKIPYPVKVHVP 400
           +PYP+   +P P+ V +P
Sbjct: 630 VPYPIIIPLPLPIPVPIP 647


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,849
Number of Sequences: 2352
Number of extensions: 12258
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)