Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B20
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362...    31   1.2  
10_03_0015 - 7079715-7079898,7080107-7080362,7080858-7081740           29   3.6  
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160           29   6.2  
03_02_0891 - 12204998-12205057,12205166-12205254,12205447-122058...    28   8.3  

>04_04_1231 -
           31934745-31935125,31935230-31935325,31936215-31936277,
           31936393-31936593,31936738-31936839,31936972-31937430,
           31937524-31937712,31938325-31938442,31939033-31939307,
           31939853-31939930
          Length = 653

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
 Frame = +3

Query: 105 YNNMEGCSNNVNEHNTNYGQIYDENVILNSVRSR-KKVSELPNCPVCSCTVRQGEL---E 272
           + N      N +E + N  Q+  +N  L +   R K+     +CP C      GE+   E
Sbjct: 149 FQNKRTQMKNQHERHEN-SQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDE 207

Query: 273 HHLDLELARLNK 308
           HHL +E ARL +
Sbjct: 208 HHLRIENARLRE 219


>10_03_0015 - 7079715-7079898,7080107-7080362,7080858-7081740
          Length = 440

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 177 NVILNSVRSRKKVSELPNCPVCSCTVRQGELEHHLD 284
           NVIL+ +  +KK    P CP+ +C++   + +H LD
Sbjct: 342 NVILHKLPEKKKD---PGCPMITCSIGAQQFDHLLD 374


>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
          Length = 749

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 144 HNTNYGQIYDENVILNSVRSRKKVSELPNCPVCSCTVRQGEL---EHHLDLELARL 302
           H  N  +  +E +   ++R ++ ++   +CP C      GE+   EHHL LE ARL
Sbjct: 150 HENNALRAENEKLRAENMRYKEALANA-SCPNCGGPAAIGEMSFDEHHLRLENARL 204


>03_02_0891 -
           12204998-12205057,12205166-12205254,12205447-12205861,
           12206087-12206381,12206508-12206755,12207430-12207636
          Length = 437

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 607 ISAPVPXRHLKACLCSLEVGKV-VLQTGHSPFCGGGVL 497
           +S P   R +  C+ SL++GK   L+  H P  GGG+L
Sbjct: 9   VSRPDVVRDINLCV-SLDLGKSSYLKATHEPLFGGGIL 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,464,189
Number of Sequences: 37544
Number of extensions: 421834
Number of successful extensions: 1372
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)