Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_B14
         (853 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P...   126   4e-29
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P...   126   4e-29
AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p pro...    30   4.6  
AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-P...    30   4.6  

>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
           isoform B protein.
          Length = 1006

 Score =  126 bits (304), Expect = 4e-29
 Identities = 59/104 (56%), Positives = 76/104 (73%)
 Frame = +1

Query: 373 LKVSHKGLKIIQNVTAKGKQQTIKHFIPHGSITSAVSQGDVVACVLLLYNPLTGCPVHVH 552
           L+VSHKG+KI+Q  +        KH IPH +ITS+V   D+VACVLLLYNP T CP+HVH
Sbjct: 54  LQVSHKGIKIVQGAS--------KHLIPHSAITSSVQTDDIVACVLLLYNPATKCPLHVH 105

Query: 553 AYRCDSEHTAEMLYTHLQALIDRPENQKKFADIERKLQMRGALP 684
           AYRCDSE TAE L+  LQ LI+RP+NQK+F ++E +L +   +P
Sbjct: 106 AYRCDSETTAEALHLQLQILINRPDNQKRFEELETRLGILPPIP 149


>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
           isoform A protein.
          Length = 1006

 Score =  126 bits (304), Expect = 4e-29
 Identities = 59/104 (56%), Positives = 76/104 (73%)
 Frame = +1

Query: 373 LKVSHKGLKIIQNVTAKGKQQTIKHFIPHGSITSAVSQGDVVACVLLLYNPLTGCPVHVH 552
           L+VSHKG+KI+Q  +        KH IPH +ITS+V   D+VACVLLLYNP T CP+HVH
Sbjct: 54  LQVSHKGIKIVQGAS--------KHLIPHSAITSSVQTDDIVACVLLLYNPATKCPLHVH 105

Query: 553 AYRCDSEHTAEMLYTHLQALIDRPENQKKFADIERKLQMRGALP 684
           AYRCDSE TAE L+  LQ LI+RP+NQK+F ++E +L +   +P
Sbjct: 106 AYRCDSETTAEALHLQLQILINRPDNQKRFEELETRLGILPPIP 149


>AY051863-1|AAK93287.1| 1059|Drosophila melanogaster LD35990p
           protein.
          Length = 1059

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 547 VHAYRCDSEHT-AEMLYTHLQALIDRPENQKKFADIERKLQ 666
           V  Y+CD+    AE    HLQ L DR + + +  + ERK++
Sbjct: 67  VEPYKCDNSRLLAECNELHLQFLRDREDYELRLCESERKIR 107


>AE014296-2475|AAF49663.3| 1059|Drosophila melanogaster CG17081-PA
           protein.
          Length = 1059

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 547 VHAYRCDSEHT-AEMLYTHLQALIDRPENQKKFADIERKLQ 666
           V  Y+CD+    AE    HLQ L DR + + +  + ERK++
Sbjct: 67  VEPYKCDNSRLLAECNELHLQFLRDREDYELRLCESERKIR 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,792,894
Number of Sequences: 53049
Number of extensions: 655787
Number of successful extensions: 1526
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)