Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_A24
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 126 2e-29
07_01_0578 + 4295386-4296489,4297394-4297507 126 2e-29
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.29
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.51
08_02_1278 - 25838146-25839411 32 0.67
10_02_0199 + 6668902-6669293,6669825-6669882 31 1.5
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 31 1.5
07_03_1026 - 23369298-23370326 30 2.0
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 30 2.0
03_05_0366 - 23505755-23506441 30 2.0
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 2.7
08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887 30 2.7
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 3.6
07_03_0600 + 19866757-19867218,19867920-19868429 29 4.7
04_04_0347 + 24564589-24565296 25 5.9
03_05_0452 + 24464134-24464442 29 6.2
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 28 8.3
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 8.3
07_01_0380 - 2834080-2834451,2835945-2836130 28 8.3
02_04_0457 + 23093020-23093343,23093798-23093806 28 8.3
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 126 bits (305), Expect = 2e-29
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = +3
Query: 375 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 554
AFGNMCRGGRMFAPTK WRRWH ARGH IE +PE
Sbjct: 94 AFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGVPEF 153
Query: 555 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 734
PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I RKGPLI+
Sbjct: 154 PLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKGPLIV 213
Score = 116 bits (279), Expect = 2e-26
Identities = 57/91 (62%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +2
Query: 104 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 280
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 281 HQTSAESWGTGRAVARIPRVRGGGTHRSGQG 373
HQTSAESWGTGRAV+RIPRV GGGTHR+GQG
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQG 93
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 126 bits (304), Expect = 2e-29
Identities = 62/132 (46%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +3
Query: 375 AFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 554
AFGNMCRGGRMFAPTK WR+WH ARGH IE +PEL
Sbjct: 95 AFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETVPEL 154
Query: 555 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 734
PLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I RKGPLI+
Sbjct: 155 PLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGPLIV 214
Query: 735 XNXD-QGLTRAF 767
+ + +AF
Sbjct: 215 YGTEGSKIVKAF 226
Score = 114 bits (274), Expect = 1e-25
Identities = 56/89 (62%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
Frame = +2
Query: 113 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 286
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 287 TSAESWGTGRAVARIPRVRGGGTHRSGQG 373
TSAESWGTGRAV+RIPRV GGGTHR+GQG
Sbjct: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQG 94
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 76 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 231
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 76 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 231
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 623 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 516
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 293 AESWGTGRAVARIPRVRGGGTHR 361
A+SW TGRA A + R R GG R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRR 58
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = -1
Query: 446 ATVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 270
AT A P + G H +T H T + Y +HHH H Q H + H PP
Sbjct: 352 ATQAAGPAIYGA-HPATQPHYTAAVAAQEYYHHHHHHL---QHHPAAAALVHHRAVAPP 406
>07_03_1026 - 23369298-23370326
Length = 342
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -1
Query: 503 DASSSNGCCQGRS-PLSEVDATVPAPPGLRGGEHTSTTTHVTEGXPDRT 360
DA S+ GC + RS P+ AT PA R + T H D T
Sbjct: 190 DAESAQGCARTRSPPVRSARATTPAASPSRSKKETPVRAHAAVRGDDAT 238
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 614 EDDSLFGLVDLLDFVGYN--QGKLGNLFNNVSSSLNERWDASSSNGCCQGR 468
+DD +F V LLD VGYN +G++ N SL + W S CCQG+
Sbjct: 331 DDDVVFLHVKLLDLVGYNFISRTVGSILIN---SLLDAWH-SCVYICCQGK 377
>03_05_0366 - 23505755-23506441
Length = 228
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 179 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 355
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 356 H 358
+
Sbjct: 168 N 168
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 76 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 231
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887
Length = 1205
Score = 29.9 bits (64), Expect = 2.7
Identities = 31/89 (34%), Positives = 39/89 (43%)
Frame = -1
Query: 683 LTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERW 504
L S TLR VHL + QE + L L L VG N+ K G F + S L++
Sbjct: 947 LKSLHTLRHVHLAWGNTVI---QEIERLTQLRKL-GVVGINK-KNGPSFYSAISKLSQLE 1001
Query: 503 DASSSNGCCQGRSPLSEVDATVPAPPGLR 417
S G CQG S +T P P L+
Sbjct: 1002 SLSVCAGWCQGLHGTSSSSSTSPPPENLQ 1030
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 76 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 231
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = -1
Query: 437 PAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 270
P PP + GG H + G P +G++ + P+ H++ PP
Sbjct: 4 PPPPTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
>04_04_0347 + 24564589-24565296
Length = 235
Score = 25.4 bits (53), Expect(2) = 5.9
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -1
Query: 407 HTSTTTHVTEGXPDRTYGYHHHGH 336
H V + P ++ +HHHGH
Sbjct: 78 HAPAPAPVRDDKPSPSHHHHHHGH 101
Score = 21.8 bits (44), Expect(2) = 5.9
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 359 YGYHHHGHA 333
+G+HHH HA
Sbjct: 99 HGHHHHRHA 107
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 235 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 336
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 433 AGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSFPWL*PTKSRRSTRPNRLSS 612
A AST+ G RPW ++++R + R P+ W + RR+ R + +++
Sbjct: 8 AAAAASTARGGHRPWTAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRRAPRRHAVAA 67
Query: 613 S*GAS 627
GA+
Sbjct: 68 KAGAA 72
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 476 QGRSPLSEVDATVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHG 339
Q RSP + + P P G GG H S+++ + G + +HHHG
Sbjct: 102 QRRSPSTAPPPSPPQPSG-GGGHHHSSSS--SGGGGGGYHNHHHHG 144
>07_01_0380 - 2834080-2834451,2835945-2836130
Length = 185
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +2
Query: 281 HQ-TSAESWGTGRAVARIPRVRGGGTHRSGQGCLR*HVSWWTYVRPH---EALAALAPSR 448
HQ S+ G A AR V G + SG G V P +A AA AP+
Sbjct: 92 HQGESSSGGGVSTAAARHCDVAGSSSSHSGSGSGSATPPRPALVSPRAGLQAAAAAAPTM 151
Query: 449 QPPTAESGLGSSR 487
P A SGL R
Sbjct: 152 NQPPAASGLSMKR 164
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 278 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 373
G + S W G A A VRGGG RSG G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGG 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,001,154
Number of Sequences: 37544
Number of extensions: 562775
Number of successful extensions: 1919
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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