Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_P12
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    37   3e-04
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    32   0.008
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.39 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.39 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.39 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.90 
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    25   1.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.7  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   4.8  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   8.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 36.7 bits (81), Expect = 3e-04
 Identities = 18/37 (48%), Positives = 20/37 (54%)
 Frame = -3

Query: 646 APEVILELGWSQPCDVWSIGCIMFELYLGITLFQTHD 536
           APEVIL  G     D WS+G +MFEL  G   F   D
Sbjct: 533 APEVILNKGHDISADYWSLGVLMFELLTGTPPFTGGD 569


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 31.9 bits (69), Expect = 0.008
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -3

Query: 646 APEVILELGWSQPCDVWSIGCIMFELYLGITLFQTHDNREHLAMME 509
           +PEV+ +  + +P D+W+ G I++ L +G   F   D     A ++
Sbjct: 80  SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 125



 Score = 31.9 bits (69), Expect = 0.008
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = -1

Query: 333 DLIARMLEYEPSQRVTLRDALKHPF 259
           +LI +ML   PS+R+T  +ALKHP+
Sbjct: 145 NLINQMLTVNPSKRITASEALKHPW 169


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.39
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 664 ETMVLWCSWSKVALPKSISLTSLRFTR 744
           + ++ WC+WS+  L K  +LT   ++R
Sbjct: 383 DKIIRWCTWSEGDLEKCKALTRAAYSR 409


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.39
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 664 ETMVLWCSWSKVALPKSISLTSLRFTR 744
           + ++ WC+WS+  L K  +LT   ++R
Sbjct: 383 DKIIRWCTWSEGDLEKCKALTRAAYSR 409


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.39
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 664 ETMVLWCSWSKVALPKSISLTSLRFTR 744
           + ++ WC+WS+  L K  +LT   ++R
Sbjct: 383 DKIIRWCTWSEGDLEKCKALTRAAYSR 409


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 646 APEVILELGWSQPCDVWSIGCIMFEL 569
           APE I    ++   DVWS+G + +E+
Sbjct: 806 APEAIAFRKFTSASDVWSMGIVCWEV 831


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 42  YFEIIIYKYKLRSTDSQQNIPIIRAYDKIFITYSSLLYVQS 164
           YF  +   +KL  TD+     I+ A+  +F  +S L+ V S
Sbjct: 37  YFRDLQPLFKLACTDTFMEGVIVLAFSGLFSVFSFLILVSS 77


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 87  SQQNIPIIRAYDKIFITYSSLLYVQSIHKTSSAPLTDSTSATARVH 224
           +Q+++  IRA  K+  T  +  +V+ +H T        T  T+  H
Sbjct: 219 AQKHVKSIRAVTKLPDTSMAKSFVRKVHATKPPKPQTKTKPTSPYH 264


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 604 DVWSIGCIMF 575
           DVW  GC+MF
Sbjct: 263 DVWMAGCMMF 272


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 63  KYKLRSTDSQQNIPIIRAY 119
           K+ L+  D + + P++RAY
Sbjct: 55  KHLLKDADGRVSCPVLRAY 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,805
Number of Sequences: 438
Number of extensions: 3752
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)