Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_K06
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0) 74 2e-13
SB_17710| Best HMM Match : Peptidase_M2 (HMM E-Value=8.8e-06) 69 3e-12
SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 51 1e-06
SB_53646| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 29 3.2
SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_2227| Best HMM Match : RVT_1 (HMM E-Value=0.1) 29 5.7
SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4) 29 5.7
SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027) 29 5.7
SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10) 28 9.9
>SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1049
Score = 76.2 bits (179), Expect = 3e-14
Identities = 39/81 (48%), Positives = 47/81 (58%)
Frame = -3
Query: 593 VEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAGEHAAGDPNKKLV 414
V+PPV R E DFD AK+H+ +N Y Y+VS I+QFQFHRALC L +H L
Sbjct: 809 VKPPVARNESDFDPGAKFHIVSNSPYIGYFVSLILQFQFHRALCNLV-KHTG-----PLH 862
Query: 413 DCDIYQSVAAGNALANMXEDG 351
+C IYQS AG M G
Sbjct: 863 ECSIYQSKEAGKKFKEMLAAG 883
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/75 (34%), Positives = 35/75 (46%)
Frame = -2
Query: 348 RLXPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIGWEPTNMEYCTPSQL 169
R PWP + LTG+REM AD LLEYF PL WL + +GW+ T +
Sbjct: 884 RSRPWPQTLFKLTGEREMSADPLLEYFAPLRKWLFNYRIKNNYTLGWKQAKKTTTTTGGV 943
Query: 168 SELNVKEPASSPATQ 124
+ SP ++
Sbjct: 944 RKTLTSSTTGSPGSK 958
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 705 LPFAYTLDLFRYGVFRRKTLPEDYNCHYWKLR 610
LPF Y +D +R+ V + P +YN +W++R
Sbjct: 772 LPFTYLVDQWRWKVLAGEISPSNYNSAWWRMR 803
>SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0)
Length = 663
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -3
Query: 593 VEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAGEHAAGDPNKKLV 414
V PP++R E FD +K+H++AN Y +Y++S I+QFQ H+ +C +AG N+ L
Sbjct: 481 VRPPISRDETTFDPGSKFHIAANARYIQYFLSRILQFQLHKTVCDIAG------INEPLH 534
Query: 413 DCDIYQSVAAGNALANMXEDG 351
C IY S AG L+ M E G
Sbjct: 535 KCSIYNSTKAGQKLSAMLEMG 555
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = -2
Query: 348 RLXPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIGW---EPTNMEYCTP 178
R PW D +EA TG R+M + L EYF PL+ WL + + IGW E + + C P
Sbjct: 556 RSKPWRDTLEAFTGSRDMSVNPLKEYFHPLYQWLVEQRCQNKYKIGWPGTEGPDYDPCEP 615
Query: 177 SQLSELNVKEPASSPAT 127
L EP SS T
Sbjct: 616 PTF--LPPVEPTSSHHT 630
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 717 KXAFLPFAYTLDLFRYGVFRRKTLPEDYNCHYWKLR 610
K AFLPF Y L+ +R+ V+ + +YN +W+LR
Sbjct: 440 KIAFLPFGYLLEKWRWQVYTGEIDSSEYNKKWWELR 475
>SB_17710| Best HMM Match : Peptidase_M2 (HMM E-Value=8.8e-06)
Length = 179
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = -3
Query: 593 VEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAGEHAAGDPNKKLV 414
V PP++R E FD +K+H++AN Y +Y++S I+QFQ H+ +C +AG N+ L
Sbjct: 111 VRPPISRDETTFDPGSKFHIAANARYIQYFLSRILQFQLHKTVCDIAG------INEPLH 164
Query: 413 DCDIYQSVAAGNAL 372
C IY S AG L
Sbjct: 165 KCSIYNSTKAGQKL 178
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 717 KXAFLPFAYTLDLFRYGVFRRKTLPEDYNCHYWKLR 610
K AFLPF Y L+ +R+ V+ + +YN +W+LR
Sbjct: 70 KIAFLPFGYLLEKWRWQVYTGEIDSSEYNKKWWELR 105
>SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -2
Query: 339 PWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIGW 208
PWP A+E +TG R+M L EYF+PL DWL+++ Q IGW
Sbjct: 511 PWPLALEQMTGTRKMDVSSLKEYFKPLSDWLKSQRQEYKYTIGW 554
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -3
Query: 593 VEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAG 450
++PPV RTE+DFD AKYH+ N Y +S + AL Q+ G
Sbjct: 474 IKPPVCRTENDFDPGAKYHIPGNTPYISDMLSLGKSKPWPLALEQMTG 521
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 717 KXAFLPFAYTLDLFRYGVFRRKTLPEDYNCHYWKLR 610
K AFLPF + +D +R+ VF ++YN +WKLR
Sbjct: 433 KVAFLPFGFLIDQWRWKVFSGDITSDNYNREWWKLR 468
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -2
Query: 339 PWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIG 211
PWP A++A+TG EM L EYF+PL W++A+ + G IG
Sbjct: 167 PWPQALKAMTGTEEMDVGPLTEYFKPLITWMKAQRAKHGYPIG 209
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = -2
Query: 717 KXAFLPFAYTLDLFRYGVFRRKTLPEDYNCHYWKLR 610
K AFLPF + +D +R+ VFR + P++YN +W+LR
Sbjct: 89 KVAFLPFGFLIDQWRWRVFRGEITPQNYNRKWWELR 124
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -3
Query: 593 VEPPVNRTEDDFDAAAKYHVSANVEY 516
++PPV RTE+DFD AKYH+ AN Y
Sbjct: 130 IKPPVCRTENDFDPGAKYHIPANTPY 155
>SB_53646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 36.3 bits (80), Expect = 0.028
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 593 VEPPVNRTEDDFDAAAKYHVSANVEY 516
V+PPV R E DFD AK+H+ +N Y
Sbjct: 48 VKPPVARNESDFDPGAKFHIVSNSPY 73
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 705 LPFAYTLDLFRYGVFRRKTLPEDYNCHYWKLR 610
LPF Y +D +R+ V + P +YN +W++R
Sbjct: 11 LPFTYLVDQWRWKVLAGEISPSNYNSAWWRMR 42
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 619 EAKGAAXKAWSRPSIELRTTSTPQPSTMCLPTSNTPDIT 503
E A + W I + TS P PS + SNTP IT
Sbjct: 197 EQSSTAKEFWRHLKIAIGQTSKPSPSQLGGNASNTPTIT 235
>SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 619 EAKGAAXKAWSRPSIELRTTSTPQPSTMCLPTSNTPDIT 503
E A + W I + TS P PS + SNTP IT
Sbjct: 233 EQSSTAKEFWRHLKIAIGQTSKPSPSQLRGNASNTPTIT 271
>SB_2227| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 377
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 619 EAKGAAXKAWSRPSIELRTTSTPQPSTMCLPTSNTPDIT 503
E A + W I + TS P PS + SNTP IT
Sbjct: 22 EQSSTAKEFWRYLKIAIGQTSKPSPSQLRGNASNTPTIT 60
>SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4)
Length = 432
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 619 EAKGAAXKAWSRPSIELRTTSTPQPSTMCLPTSNTPDIT 503
E A + W I + TS P PS + SNTP IT
Sbjct: 248 EQSSTAKEFWRYLKIAIGQTSKPSPSQLRGNASNTPTIT 286
>SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027)
Length = 381
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 619 EAKGAAXKAWSRPSIELRTTSTPQPSTMCLPTSNTPDIT 503
E A + W I + TS P PS + SNTP IT
Sbjct: 321 EQSSTAKEFWRYLKIAIGQTSKPSPSQLRGNASNTPTIT 359
>SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1816
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 260 SGRKYSRRPSAFISRCPVSASIASGQGLRRTHL 358
SGR+ R+P++F+ V IAS +G RR HL
Sbjct: 320 SGRRSGRKPASFVKDGGVQRLIASRRGHRR-HL 351
>SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)
Length = 1514
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 557 DAAAKYHVSANVEYARYYVSFI 492
D A+ YH++ NVEY+ +V F+
Sbjct: 1057 DHASDYHLTDNVEYSAMFVEFL 1078
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,707,996
Number of Sequences: 59808
Number of extensions: 360193
Number of successful extensions: 1168
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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