Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_J15
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical p... 64 9e-11
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 64 1e-10
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 60 2e-09
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 48 1e-05
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 48 1e-05
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 30 1.7
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 30 1.7
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81094-2|CAB03156.1| 770|Caenorhabditis elegans Hypothetical pr... 28 6.9
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 28 9.1
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 28 9.1
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 28 9.1
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 28 9.1
>U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical
protein F20A1.9 protein.
Length = 433
Score = 64.5 bits (150), Expect = 9e-11
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = -2
Query: 547 RIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 368
R+GW+T SL++G+ S+G+ TG + ++ +YG DV+G YLDL+S +
Sbjct: 65 RVGWATLGGSLNIGKGLDSFGYGGTGMKSTHKKFDDYGLPFTLNDVIGCYLDLDSR--TI 122
Query: 367 SYTLNGAPLGTAFEFPRSALGDRT-LYPHVLTKNMCYKVNFGYERY 233
++ NG AF T L+P VL +N VNFG + +
Sbjct: 123 WWSKNGEQFPAAFSIDVKYKNSNTCLFPAVLCQNSSLSVNFGSQPF 168
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Frame = -2
Query: 550 IRIGWS-TDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPC 374
+RIG+S +SL LGES SW ++G+ N + ++GK + DVV DL
Sbjct: 277 VRIGFSLASTASLILGESPGSWCISASGKRAANNHFSDFGKLFDIGDVVTCIFDLSVG-- 334
Query: 373 VVSYTLNGAPLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYE 239
+SY +NG +G+ FE + GD ++P + TKN VN G E
Sbjct: 335 TISYQINGENVGSPFESLQFREGD-VIFPTICTKNANINVNMGQE 378
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = -2
Query: 547 RIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGKSLNEKDVVGAYLDLESEPCVV 368
R+GW+T SL +G S+G+ TG+ ++ +YG S DV+G +LDL+ +
Sbjct: 143 RVGWATLSGSLKIGTDFESFGYGGTGKKSFGKKFDDYGTSFTTNDVLGCFLDLDE--LKI 200
Query: 367 SYTLNGAPLGTAFEFPRSALGDRT-LYPHVLTKNMCYKVNFG 245
++ NG A++ + T LYP +L +N VNFG
Sbjct: 201 WWSKNGVQFPVAYQIDKKFKTAATCLYPAILCQNSGLGVNFG 242
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTDDSS--LHLGESEFSWGFES-TGRIVNNGEYKEYGKSLNEKDVV 407
E + LT+G ++IGW S+ + LG + S+ F+ GR + G + YGK DVV
Sbjct: 975 EFEILTAGYMKIGWMDIGSTPEIQLGADDRSYAFDGYLGRKWHQGA-ETYGKEWKIGDVV 1033
Query: 406 GAYLDLESEPCVVSYTLNGA----PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYE 239
G +LDL +S++LNG P G+ F GD + L ++NFG +
Sbjct: 1034 GCFLDLNDR--TISFSLNGELLLDPSGSEMAFDNVVCGDGLVPAMTLGSGQRGRLNFGQQ 1091
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEK-DVVGAYLDLESEPCVVSYTLNGAPLGT 335
+G+ +S+GF+ + G+ + G L EK DV+G +DL + +++NG +
Sbjct: 594 VGDDFYSYGFDGKS-MYFGGKSRRVGHKLLEKGDVIGCSIDLTIPE--IKFSVNGTYMSG 650
Query: 334 AFE 326
+F+
Sbjct: 651 SFK 653
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = -2
Query: 574 EKDALTSG-IRIGWSTDDSS--LHLGESEFSWGFES-TGRIVNNGEYKEYGKSLNEKDVV 407
E + LT+G ++IGW S+ + LG + S+ F+ GR + G + YGK DVV
Sbjct: 1096 EFEILTAGYMKIGWMDIGSTPEIQLGADDRSYAFDGYLGRKWHQGA-ETYGKEWKIGDVV 1154
Query: 406 GAYLDLESEPCVVSYTLNGA----PLGTAFEFPRSALGDRTLYPHVLTKNMCYKVNFGYE 239
G +LDL +S++LNG P G+ F GD + L ++NFG +
Sbjct: 1155 GCFLDLNDR--TISFSLNGELLLDPSGSEMAFDNVVCGDGLVPAMTLGSGQRGRLNFGQQ 1212
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -2
Query: 511 LGESEFSWGFESTGRIVNNGEYKEYGKSLNEK-DVVGAYLDLESEPCVVSYTLNGAPLGT 335
+G+ +S+GF+ + G+ + G L EK DV+G +DL + +++NG +
Sbjct: 715 VGDDFYSYGFDGKS-MYFGGKSRRVGHKLLEKGDVIGCSIDLTIPE--IKFSVNGTYMSG 771
Query: 334 AFE 326
+F+
Sbjct: 772 SFK 774
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = -2
Query: 556 SGIRIGWSTDDSSLH--LGESEFSWGFEST-GRIVNNGEYKEYG-KSLNEKDVVGAYLDL 389
S IRIGWS +SL +G ++FS+G+ S G + + K+Y + DV+G + L
Sbjct: 354 SHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKFHEAKGKKYHFGGFKQGDVLGCLIHL 413
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = -2
Query: 556 SGIRIGWSTDDSSLH--LGESEFSWGFEST-GRIVNNGEYKEYG-KSLNEKDVVGAYLDL 389
S IRIGWS +SL +G ++FS+G+ S G + + K+Y + DV+G + L
Sbjct: 352 SHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKFHEAKGKKYHFGGFKQGDVLGCLIHL 411
>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical
protein F27D4.6 protein.
Length = 1008
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -2
Query: 574 EKDALTSGIRIGWSTDDSSLHLGESEFSWGFESTGRIVNNGEYKEYGK 431
E++++ G+ + W + S EFS F++ ++++ ++KEY K
Sbjct: 401 EENSVIKGMIVDWKCEFCSTKQKPLEFSTEFDAIRHVISSQKHKEYMK 448
>Z81094-2|CAB03156.1| 770|Caenorhabditis elegans Hypothetical
protein F58G11.1b protein.
Length = 770
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 293 VPARAHQEHVLQSQLRIRTLQHAVKNKNSAETH*STS 183
VPAR+ QE V Q Q TLQ +S+ T STS
Sbjct: 729 VPARSEQEGVEQKQQVTSTLQQNSSKTSSSSTTKSTS 765
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +3
Query: 300 RSPSALRGNSKAVPSGAPLSVYDT-------THGSDSKSK*APTTSFSLSDFPYSLYSPL 458
++PS L K +P+ AP+ V D+ D + +PT S S + L
Sbjct: 201 QTPSWLANLPKPIPTTAPIFVADSKEKIKDEVEKPDVYTSQSPTCSSVSFKSDLSAFHQL 260
Query: 459 LTMRPVLSKPQLNSLSPRCKEESSVDQP 542
+ R ++S P +++ SP SS P
Sbjct: 261 CSDRALISSPLIDTASPSSSSSSSRISP 288
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 451 EYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSA 311
+Y+E + LN++DV+ A +D + + + G P T F P++A
Sbjct: 401 KYEELAEKLNKEDVIIAKMDATANDVPPMFEVRGFP--TLFWLPKNA 445
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 451 EYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAP 344
E++ KSL+E+ GAY+DL E C + T N P
Sbjct: 530 EHQAIWKSLDEQGADGAYIDLLKE-CYKNCTTNFTP 564
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 451 EYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAP 344
E++ KSL+E+ GAY+DL E C + T N P
Sbjct: 701 EHQAIWKSLDEQGADGAYIDLLKE-CYKNCTTNFTP 735
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 451 EYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAP 344
E++ KSL+E+ GAY+DL E C + T N P
Sbjct: 440 EHQAIWKSLDEQGADGAYIDLLKE-CYKNCTTNFTP 474
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 451 EYKEYGKSLNEKDVVGAYLDLESEPCVVSYTLNGAPLGTAFEFPRSA 311
+Y+E + LN++DV+ A +D + + + G P T F P++A
Sbjct: 401 KYEELAEKLNKEDVIIAKMDATANDVPPMFEVRGFP--TLFWLPKNA 445
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,997,797
Number of Sequences: 27780
Number of extensions: 247549
Number of successful extensions: 1012
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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