Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J10
         (785 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g03490.1 68418.m00305 UDP-glucoronosyl/UDP-glucosyl transfera...    29   2.6  
At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P4...    28   6.1  

>At5g03490.1 68418.m00305 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 465

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 314 ALIALFIILNCHGHLRNIGINRFVYFTP**FICNVRSFCIE 192
           ALI+ F +   H     IGI RF +F+   F+ +V  FC E
Sbjct: 126 ALISDFFLGWTHDLCNQIGIPRFAFFSISFFLVSVLQFCFE 166


>At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P450
           77A3p, Glycine max, PIR:T05948
          Length = 509

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 537 NVVLLYFSLMYIVMSYVIYICTYIAHN 457
           N V  +F+L+ I++S ++YI T  +HN
Sbjct: 6   NYVFFFFTLVTILLSCLVYILTRHSHN 32


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,914,220
Number of Sequences: 28952
Number of extensions: 286493
Number of successful extensions: 555
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)