Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J08
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    52   2e-05
UniRef50_UPI00015B6020 Cluster: PREDICTED: similar to Serine/thr...    42   0.024
UniRef50_UPI0000DB781D Cluster: PREDICTED: similar to PI-3-kinas...    40   0.055
UniRef50_A4H5D6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    33   6.4  
UniRef50_Q6KHW4 Cluster: Pseudouridine synthase; n=1; Mycoplasma...    33   8.4  
UniRef50_Q9C100 Cluster: Dolichyl-phosphate-mannose--protein man...    33   8.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +3

Query: 15  FLLLRWVDELTAHLLLSGYWSP 80
           FLLLRWVDELTAHL+LSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_UPI00015B6020 Cluster: PREDICTED: similar to
            Serine/threonine-protein kinase SMG1 (SMG-1); n=1;
            Nasonia vitripennis|Rep: PREDICTED: similar to
            Serine/threonine-protein kinase SMG1 (SMG-1) - Nasonia
            vitripennis
          Length = 3540

 Score = 41.5 bits (93), Expect = 0.024
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -1

Query: 656  QSNPRLSSFTAEYVSRSTLGVGSRXXXXXXXXXLHRHGVDIAAEVEQKEIG 504
            Q N  +  FTA+YVSR  +GV S+         L R G+++ +E+EQ++IG
Sbjct: 3048 QLNKPIRLFTADYVSRQLIGVTSQSLGIALCFLLQRMGLNVTSEIEQRDIG 3098


>UniRef50_UPI0000DB781D Cluster: PREDICTED: similar to
            PI-3-kinase-related kinase SMG-1; n=1; Apis
            mellifera|Rep: PREDICTED: similar to PI-3-kinase-related
            kinase SMG-1 - Apis mellifera
          Length = 3324

 Score = 40.3 bits (90), Expect = 0.055
 Identities = 20/49 (40%), Positives = 28/49 (57%)
 Frame = -1

Query: 650  NPRLSSFTAEYVSRSTLGVGSRXXXXXXXXXLHRHGVDIAAEVEQKEIG 504
            N  +  FTA+YVSR  LGV S+         L R G+ +  E+EQ++IG
Sbjct: 2821 NKPIRIFTADYVSRQLLGVTSQTLAIALCFLLQRMGLSVTTEIEQRDIG 2869


>UniRef50_A4H5D6 Cluster: Putative uncharacterized protein; n=1;
            Leishmania braziliensis|Rep: Putative uncharacterized
            protein - Leishmania braziliensis
          Length = 2087

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +2

Query: 479  PRLRTKKTYQFPSVPLRQQCRLRADVAGDRA---RPPELVSPRPALSAIRT 622
            PR R ++T   P  P    CR RA  +   A   +P EL  P P  +A RT
Sbjct: 1068 PRKRERQTSSSPDTPSATACRARASASASTATAAKPRELTPPLPPPAAART 1118


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 209 WWYPPVRTHKRSLHQ 253
           WWY P RTHKRS H+
Sbjct: 571 WWYLPARTHKRSYHR 585


>UniRef50_Q6KHW4 Cluster: Pseudouridine synthase; n=1; Mycoplasma
           mobile|Rep: Pseudouridine synthase - Mycoplasma mobile
          Length = 298

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 24/87 (27%), Positives = 39/87 (44%)
 Frame = +3

Query: 288 IITRCYSFNVEADREQLLSTYFIREFGTRLRDSNIGASLDTNAPDFLSFXPRRP*IA*KI 467
           I+ R  SF ++ + +  +    I+E  T     NI   +     DFL    R       +
Sbjct: 43  ILVRKASFKIKENDQIEIKKQLIKE--TNAIAQNINLDIVFENEDFLIINKRSG----MV 96

Query: 468 CIPGPGSERRKLTNFLLFHFGSNVDSV 548
             P PG+ +  L N LLFHF +N+ ++
Sbjct: 97  VHPAPGNMQDTLVNALLFHFKNNLSNI 123


>UniRef50_Q9C100 Cluster: Dolichyl-phosphate-mannose--protein
           mannosyltransferase 2; n=1; Schizosaccharomyces
           pombe|Rep: Dolichyl-phosphate-mannose--protein
           mannosyltransferase 2 - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 739

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = -2

Query: 652 VTLDFPASQRSTYRAQRWAWAHELWRPRSVSCYIGTESTLLPKWNRRKLVSFLRSEPGP 476
           V + +  + R  Y  +  +   +L+ P  V CY+ + S+ LP W   ++  +   +P P
Sbjct: 452 VNILYDTAHRDAYNVRSLSTVFQLYNP-VVGCYLSSSSSSLPSWGFGQIEMYCDPDPDP 509


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 839,554,900
Number of Sequences: 1657284
Number of extensions: 18020813
Number of successful extensions: 42876
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42842
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)