Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_J08
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1256 + 32124826-32124946,32125388-32125554,32125731-321259...    31   1.4  
02_03_0161 + 15828887-15828985,15829066-15829686,15829759-158299...    29   3.3  
01_06_0088 + 26305326-26306372                                         29   4.3  
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361...    29   5.7  
03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419     29   5.7  
03_02_0516 + 9049781-9050206,9050207-9050341                           28   7.6  

>04_04_1256 +
           32124826-32124946,32125388-32125554,32125731-32125934,
           32126063-32126222,32126379-32126592,32126707-32126854
          Length = 337

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 690 TMXRAPVPLAPTK*PSTFQLHSGVRIALNAGRGLTSSG 577
           T+  AP PL  T  P+T  L SG    L   +GL ++G
Sbjct: 196 TLGAAPTPLTTTSIPTTLSLLSGDEAQLKTLKGLAATG 233


>02_03_0161 +
           15828887-15828985,15829066-15829686,15829759-15829908,
           15829994-15830389,15830455-15830487,15830553-15830693,
           15830793-15830924,15830999-15831082,15831159-15831461,
           15831543-15831734,15831805-15831942,15832019-15832143,
           15832223-15832319
          Length = 836

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 607 QRWAWAH-ELWRPRSVSCYIGTESTLLPKWNRRKLVSFLR 491
           Q WAW H  +  P     Y+G    L+  WN   ++++L+
Sbjct: 240 QFWAWEHVHINDPMCTLTYVGRPPPLMAYWNEMNVMTWLK 279


>01_06_0088 + 26305326-26306372
          Length = 348

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 610 AQRWAWAHELWRPRSVSCYI 551
           A+RWA A  LWRP  V+ Y+
Sbjct: 274 AERWARAAGLWRPPKVAAYL 293


>05_01_0455 -
           3614011-3614503,3615007-3615072,3615154-3615347,
           3615562-3615657,3615790-3615829,3616729-3616856
          Length = 338

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -3

Query: 621 VRIALNAGRGLTSSGGRALSPATSARSRHCCRSGTEGNW 505
           V+ A    RGL  S G    PA    S HC   G EG+W
Sbjct: 83  VQFARGVERGLGGSRGYKARPAHG--SDHCFNCGMEGHW 119


>03_05_0623 - 26208309-26208343,26208931-26210220,26210350-26210419
          Length = 464

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = -3

Query: 660 PTK*PSTFQLHSGVRIALNAGRGLTSSGGRALSPATSARSRHCCRSGTEGNW 505
           PT   S    H+ + +A +AG  LTSS G A SP+    S+   R G  G W
Sbjct: 328 PTSERSFGLYHTDLTMAYDAG--LTSSSGGAASPSNGGASQQQPRGG-GGGW 376


>03_02_0516 + 9049781-9050206,9050207-9050341
          Length = 186

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +3

Query: 147 QRLPHPSNRNALLLHGGNRCGGGTHPCGLTR 239
           Q  P P       L  G RCGG T P  LTR
Sbjct: 20  QATPLPLFLRYAALRRGGRCGGATRPLRLTR 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,565,131
Number of Sequences: 37544
Number of extensions: 544358
Number of successful extensions: 1393
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)