Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I23
         (813 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g25757.1 68418.m03055 expressed protein                            107   9e-24
At5g25754.1 68418.m03054 expressed protein                            107   9e-24
At3g51650.1 68416.m05664 expressed protein                             28   6.4  
At3g51640.1 68416.m05663 expressed protein                             28   6.4  
At3g60840.1 68416.m06806 microtubule associated protein (MAP65/A...    28   8.5  

>At5g25757.1 68418.m03055 expressed protein
          Length = 514

 Score =  107 bits (257), Expect = 9e-24
 Identities = 64/168 (38%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
 Frame = -2

Query: 740 FSSRSYXXDQIXXQTEQMYHLLAICLVLHPQC--VDESIQQVLREKNYHEKMFKMQYGD- 570
           +  +S   +Q+  + EQMY LLA+ L L PQ   VDES+   LR+K Y EKM +M   D 
Sbjct: 302 YHQKSPQYEQLLKKNEQMYALLALSLSLCPQTKLVDESVNSQLRDK-YGEKMMRMLRSDD 360

Query: 569 --LGEFESCFTFACPKFLSACPPPI--EPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRS 402
              G ++  F++ACPKF++   PP   EP  NY +DA + Q ++F+ EV+QQ++L  +R+
Sbjct: 361 EAFGIYDELFSYACPKFITPSAPPTFEEPLVNYNQDAYRLQLKMFLYEVKQQQLLSGVRT 420

Query: 401 YLKLYTTLPMAKLAAFMSAARGSERDAAREHAALAIHLLCFKHKMKNV 258
           +LK+Y+++ +AKLA +M            +   L   LL +KHK  +V
Sbjct: 421 FLKVYSSISLAKLANYMEV----------DEPTLRTILLTYKHKTHSV 458



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 22/53 (41%), Positives = 39/53 (73%)
 Frame = -3

Query: 229 DGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 71
           DG+  S +++DF+I+NDMI++ ++K A RYGDFF+R++ K E +   +  +K+
Sbjct: 461 DGRIISNADIDFFINNDMIYVVESKPAKRYGDFFLRQIAKLEGVINDMDRVKL 513


>At5g25754.1 68418.m03054 expressed protein
          Length = 514

 Score =  107 bits (257), Expect = 9e-24
 Identities = 64/168 (38%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
 Frame = -2

Query: 740 FSSRSYXXDQIXXQTEQMYHLLAICLVLHPQC--VDESIQQVLREKNYHEKMFKMQYGD- 570
           +  +S   +Q+  + EQMY LLA+ L L PQ   VDES+   LR+K Y EKM +M   D 
Sbjct: 302 YHQKSPQYEQLLKKNEQMYALLALSLSLCPQTKLVDESVNSQLRDK-YGEKMMRMLRSDD 360

Query: 569 --LGEFESCFTFACPKFLSACPPPI--EPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRS 402
              G ++  F++ACPKF++   PP   EP  NY +DA + Q ++F+ EV+QQ++L  +R+
Sbjct: 361 EAFGIYDELFSYACPKFITPSAPPTFEEPLVNYNQDAYRLQLKMFLYEVKQQQLLSGVRT 420

Query: 401 YLKLYTTLPMAKLAAFMSAARGSERDAAREHAALAIHLLCFKHKMKNV 258
           +LK+Y+++ +AKLA +M            +   L   LL +KHK  +V
Sbjct: 421 FLKVYSSISLAKLANYMEV----------DEPTLRTILLTYKHKTHSV 458



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 22/53 (41%), Positives = 39/53 (73%)
 Frame = -3

Query: 229 DGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 71
           DG+  S +++DF+I+NDMI++ ++K A RYGDFF+R++ K E +   +  +K+
Sbjct: 461 DGRIISNADIDFFINNDMIYVVESKPAKRYGDFFLRQIAKLEGVINDMDRVKL 513


>At3g51650.1 68416.m05664 expressed protein
          Length = 826

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 212 WF*VGFLHRQRYDSYRRYESGSSLW 138
           W   G+LHRQ +     + SGSS W
Sbjct: 148 WSENGYLHRQEWSDNSTWTSGSSYW 172


>At3g51640.1 68416.m05663 expressed protein
          Length = 826

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 212 WF*VGFLHRQRYDSYRRYESGSSLW 138
           W   G+LHRQ +     + SGSS W
Sbjct: 148 WSENGYLHRQEWSDNSTWTSGSSYW 172


>At3g60840.1 68416.m06806 microtubule associated protein
           (MAP65/ASE1) family protein low similarity to protein
           regulating cytokinesis 1 (PRC1) [Homo sapiens]
           GI:2865521; contains Pfam profile PF03999: Microtubule
           associated protein (MAP65/ASE1 family)
          Length = 648

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/36 (27%), Positives = 25/36 (69%)
 Frame = -3

Query: 190 IDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLH 83
           +++++I ++  K+  +  +  +RK L+ EE++RK+H
Sbjct: 267 VEDEVIRLSKIKIT-KIKEVILRKRLELEEISRKMH 301


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,929,928
Number of Sequences: 28952
Number of extensions: 376474
Number of successful extensions: 865
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)