Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I22
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   6.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 231 GAPPSPWQVSLPSCPPAHTKL 293
           G  P  WQ + P  PPA ++L
Sbjct: 60  GLLPLAWQANSPPSPPAPSEL 80


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 182 DQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAH 286
           D  G +     Y T     T +LA+   LLS G H
Sbjct: 200 DMSGGMHQMANYSTDYSSLTHSLAASNHLLSSGQH 234


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 753 VRWXRSPDTSSSRHDWRSHRL 691
           V+  R PD  S R  W+S R+
Sbjct: 35  VQGVRGPDFRSLRFSWKSARV 55


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 753 VRWXRSPDTSSSRHDWRSHRL 691
           V+  R PD  S R  W+S R+
Sbjct: 35  VQGVRGPDFRSLRFSWKSARV 55


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +2

Query: 161 PAPDAPGDQPGQLVAAVTYGTGQGGS-TVALASVPALLSPG 280
           P P       G LV+  +Y  G  G   V++AS   L   G
Sbjct: 78  PVPHTSSFNMGYLVSPYSYANGAAGPIPVSMASKMGLAPTG 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,880
Number of Sequences: 336
Number of extensions: 4553
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)