Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I21
(792 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 383 e-107
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 383 e-107
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 383 e-107
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 380 e-106
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 380 e-106
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 366 e-101
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 282 2e-76
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 150 1e-36
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 148 5e-36
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 146 1e-35
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 146 1e-35
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 146 1e-35
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 146 1e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 145 3e-35
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 144 4e-35
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 144 8e-35
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 78 6e-15
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 75 4e-14
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.29
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.29
At2g40070.1 68415.m04923 expressed protein 33 0.29
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At3g11690.1 68416.m01433 expressed protein 29 3.5
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.7
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.2
At1g68080.1 68414.m07777 expressed protein 28 6.2
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.2
At3g26855.1 68416.m03360 hypothetical protein 28 8.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 383 bits (943), Expect = e-107
Identities = 172/213 (80%), Positives = 192/213 (90%)
Frame = -2
Query: 776 NXXXXIGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQ 597
N + ++SS+TAS RFDGALNVD+T LVPYPRIHF L +YAPVISAEKA+HEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQ 285
Query: 596 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 417
LSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVD
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 416 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 237
WCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFV
Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 405
Query: 236 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 383 bits (943), Expect = e-107
Identities = 172/213 (80%), Positives = 192/213 (90%)
Frame = -2
Query: 776 NXXXXIGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQ 597
N + ++SS+TAS RFDGALNVD+T LVPYPRIHF L +YAPVISAEKA+HEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQ 285
Query: 596 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 417
LSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVD
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 416 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 237
WCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFV
Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 405
Query: 236 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 383 bits (943), Expect = e-107
Identities = 172/213 (80%), Positives = 192/213 (90%)
Frame = -2
Query: 776 NXXXXIGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQ 597
N + ++SS+TAS RFDGALNVD+T LVPYPRIHF L +YAPVISAEKA+HEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQ 285
Query: 596 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 417
LSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVD
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 416 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 237
WCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFV
Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 405
Query: 236 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 380 bits (936), Expect = e-106
Identities = 172/213 (80%), Positives = 188/213 (88%)
Frame = -2
Query: 776 NXXXXIGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQ 597
N I I+SS+T S RFDGA+NVD+T LVPYPRIHF L +YAPVISA KAYHEQ
Sbjct: 226 NLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQ 285
Query: 596 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 417
LSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVD
Sbjct: 286 LSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVD 345
Query: 416 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 237
WCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFV
Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFV 405
Query: 236 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 380 bits (936), Expect = e-106
Identities = 172/213 (80%), Positives = 188/213 (88%)
Frame = -2
Query: 776 NXXXXIGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQ 597
N I I+SS+T S RFDGA+NVD+T LVPYPRIHF L +YAPVISA KAYHEQ
Sbjct: 226 NLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQ 285
Query: 596 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 417
LSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVD
Sbjct: 286 LSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVD 345
Query: 416 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 237
WCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFV
Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFV 405
Query: 236 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 366 bits (900), Expect = e-101
Identities = 164/211 (77%), Positives = 182/211 (86%)
Frame = -2
Query: 776 NXXXXIGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQ 597
N I +SS+T S RFDGA+NVD+T LVPYPRIHF L +YAPVIS+ KAYHEQ
Sbjct: 226 NLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQ 285
Query: 596 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 417
SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVD
Sbjct: 286 FSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVD 345
Query: 416 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 237
WCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFV
Sbjct: 346 WCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFV 405
Query: 236 HWYVGEGMEEGEFSEAREDLAALEKDYEEVG 144
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 282 bits (691), Expect = 2e-76
Identities = 126/161 (78%), Positives = 142/161 (88%)
Frame = -2
Query: 776 NXXXXIGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQ 597
N + ++SS+TAS RFDGALNVD+T LVPYPRIHF L +YAPVISAEKA+HEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQ 285
Query: 596 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 417
LSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVD
Sbjct: 286 LSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVD 345
Query: 416 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 294
WCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 346 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 150 bits (363), Expect = 1e-36
Identities = 71/204 (34%), Positives = 116/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T S RF G LN DL + L+P+PR+HF +V +AP+ S + L+V E
Sbjct: 230 ISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPE 289
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+W P
Sbjct: 290 LTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNN 349
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 350 VKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 401
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 402 EGMDEMEFTEAESNMNDLVSEYQQ 425
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 148 bits (358), Expect = 5e-36
Identities = 71/204 (34%), Positives = 115/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T S RF G LN DL + L+P+PR+HF +V +AP+ S + L+V E
Sbjct: 230 ISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPE 289
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+W P
Sbjct: 290 LTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNN 349
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + PP ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 350 VKSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 401
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 402 EGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 146 bits (355), Expect = 1e-35
Identities = 69/204 (33%), Positives = 115/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T RF G LN DL + L+P+PR+HF +V +AP+ S + L+V E
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPE 288
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 289 LTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 349 VKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 146 bits (355), Expect = 1e-35
Identities = 69/204 (33%), Positives = 115/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T RF G LN DL + L+P+PR+HF +V +AP+ S + L+V E
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPE 288
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 289 LTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 349 VKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 146 bits (355), Expect = 1e-35
Identities = 69/204 (33%), Positives = 115/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T RF G LN DL + L+P+PR+HF +V +AP+ S + L+V E
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPE 288
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNN 348
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 349 VKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 146 bits (354), Expect = 1e-35
Identities = 69/204 (33%), Positives = 115/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T RF G LN DL + L+P+PR+HF +V +AP+ S + L+V E
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPE 288
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 348
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 349 VKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 145 bits (351), Expect = 3e-35
Identities = 70/204 (34%), Positives = 115/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T RF G LN DL + L+P+PR+HF +V +AP+ S + LSV E
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPE 288
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNN 348
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + + P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 349 VKSSV----CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 401 EGMDEMEFTEAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 144 bits (350), Expect = 4e-35
Identities = 69/204 (33%), Positives = 115/204 (56%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T RF G LN DL + L+P+PR+HF +V +AP+ S + LSV E
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPE 288
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNN 348
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + + P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 349 VKSSV----CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 401 EGMDEMEFTEAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 144 bits (348), Expect = 8e-35
Identities = 68/204 (33%), Positives = 114/204 (55%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 582
I +S +T RF G LN DL + L+P+PR+HF +V +AP+ S + L+V E
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPE 288
Query: 581 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG 402
+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 289 LTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 348
Query: 401 FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 222
K + + P G + A + N+T+I E + R+ +F M+ ++AF+HWY G
Sbjct: 349 VKSSV----CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
Query: 221 EGMEEGEFSEAREDLAALEKDYEE 150
EGM+E EF+EA ++ L +Y++
Sbjct: 401 EGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 78.2 bits (184), Expect = 6e-15
Identities = 52/213 (24%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKA-YHEQLSVA 585
+ ++S+ T + R+ G +N DL + L+P PR HF + Y P+ +A + +V
Sbjct: 232 VSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVL 291
Query: 584 EITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 420
++ + N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F+
Sbjct: 292 DVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI 351
Query: 419 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 240
DW P +V ++ + P V ++ + ML++ T+I ++R ++D + K+AF
Sbjct: 352 DWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHLFSRCLSQYDKLRKKQAF 406
Query: 239 VHWYVGEGM----EEGEFSEAREDLAALEKDYE 153
+ Y M + EF E+R+ + +L +Y+
Sbjct: 407 LDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 75.4 bits (177), Expect = 4e-14
Identities = 50/213 (23%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Frame = -2
Query: 761 IGXIVSSITASXRFDGALNVDLTXVPD*LVPYPRIHFPLVTYAPVISAEKA-YHEQLSVA 585
+ ++S+ T + R+ G +N DL + L+P PR HF + Y P+ +A + +V
Sbjct: 232 VSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVL 291
Query: 584 EITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFV 420
++ + N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F+
Sbjct: 292 DVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI 351
Query: 419 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF 240
+W P +V ++ + P V ++ + ML++ T+I +++ ++D + K+AF
Sbjct: 352 EWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIRHLFSKCLSQYDKLRKKQAF 406
Query: 239 VHWYVGEGM----EEGEFSEAREDLAALEKDYE 153
+ Y M + EF E+R+ + +L +Y+
Sbjct: 407 LDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 283 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 176
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 459 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 566
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 32.7 bits (71), Expect = 0.29
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = -3
Query: 667 TPVSTS-HWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 491
TP+S S S +R + +PT ++ S S T S+P T +A P ++T L+ T
Sbjct: 236 TPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TA 293
Query: 490 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 368
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 294 RSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 378 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 482
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g11690.1 68416.m01433 expressed protein
Length = 252
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -3
Query: 685 QTNXCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLA 506
QT TP S+ S RQ L R +++S PSPR+ S+P T A+ W
Sbjct: 15 QTKPSDTPSSSPSRSNRRQPLLQR--SLSS-PSPRASCGGSTPAEFCGGTTASCAAVWCC 71
Query: 505 VCCTVV 488
C +V
Sbjct: 72 CPCGLV 77
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 155 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 271
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 494 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 351
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 420 DELDSTLGFDGSDGRVHILGYDVTTVQ 500
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +2
Query: 68 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 229
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 230 TSA 238
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 262 SCTPSVLSCTGTSVRVWRRESSPK 191
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,249,683
Number of Sequences: 28952
Number of extensions: 370384
Number of successful extensions: 1427
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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