Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I20
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.33
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 33 0.33
Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical pr... 30 2.3
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 4.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 4.1
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 29 4.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 5.4
U41992-9|AAK93854.1| 294|Caenorhabditis elegans Hypothetical pr... 28 7.1
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -1
Query: 646 LXYKTCIRPVMTYASVVFAHAARTNLKSLQVIQSRFCR 533
L YKT IRP + Y +VV + +++ K+++ +Q+ F R
Sbjct: 222 LLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -1
Query: 646 LXYKTCIRPVMTYASVVFAHAARTNLKSLQVIQSRFCR 533
L YKT IRP + Y +VV + +++ K+++ +Q+ F R
Sbjct: 192 LLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>Z83221-1|CAB05709.1| 246|Caenorhabditis elegans Hypothetical
protein C49A1.1 protein.
Length = 246
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -1
Query: 577 TNLKSLQVIQSRFCRIAVGAPWFLRNVDL---HDDLELDSFSKYLQSASLRHFEKAARHE 407
TN++ + ++ R G W+LRN + H+D + + + ++ +K + E
Sbjct: 107 TNVQCIYFVEDGKKRRMAGVTWYLRNDEKSKNHEDYNMIAIYETIREKRFEEVQKIRKLE 166
Query: 406 NPLIVAAGNYIPDPVD 359
+ G ++ +P D
Sbjct: 167 KEEALRRGGWLGEPTD 182
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 490 HDDLELDSFSKYLQSASLRHFEKAARHENPLIVAAGNYI 374
H D E ++ ++ + S RH ++ E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 490 HDDLELDSFSKYLQSASLRHFEKAARHENPLIVAAGNYI 374
H D E ++ ++ + S RH ++ E+P IV +G YI
Sbjct: 5374 HSDEEDENDAEVIDSEFYRHSQEQNNEEDPSIVESGEYI 5412
>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
protein Y67D8A.1 protein.
Length = 1020
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 353 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 174
G+ S+ K RH G S S + HH H+ + LAT + + +P + +P L
Sbjct: 944 GRASSEKKKRHVGGSSS--SSQHHHHHQQQQTPLLRLATPLTPEPSSGTVTPRAITPSPL 1001
Query: 173 SGS 165
S S
Sbjct: 1002 SSS 1004
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 478 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 311
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 3753 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 3807
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 478 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 311
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 4707 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 4761
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 478 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 311
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 5610 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 5664
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 478 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 311
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 6513 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 6567
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 478 ELDSFSKYLQSASLRH--FEKAARHENPLIVAAGNYIPDPVDRMVNRRRRPKHVITDP 311
E+D SK + S + A+ + P + A N I D R+VN KHV TDP
Sbjct: 7416 EIDDISKMIDSTDPERSILDTIAKSDIPALKAQINRIKD---RIVNADASRKHVTTDP 7470
>U41992-9|AAK93854.1| 294|Caenorhabditis elegans Hypothetical
protein F32E10.7 protein.
Length = 294
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -3
Query: 227 TSELTHRHSPLSFS--PDLLSGSRFRXRW*IQRSTALARVSVSNSPVEPRELTY*R*GEA 54
+ E+ HR+S + P+ + + R ++ + S SP+ PR++ R
Sbjct: 93 SQEIDHRYSLIQMDSIPENMVTNEMEERLATTQNEDIIPESSQRSPITPRKIHEKRASIT 152
Query: 53 EIASQGYQHR*EKKK 9
E+ ++ +HR +K K
Sbjct: 153 EVTTENLRHRFQKMK 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,369,909
Number of Sequences: 27780
Number of extensions: 348046
Number of successful extensions: 926
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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