Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I18
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   7.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   7.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   7.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   7.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   9.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.4  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 449 PGSICFGNHHL 481
           PG   FGNHH+
Sbjct: 45  PGGDFFGNHHI 55


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 449 PGSICFGNHHL 481
           PG   FGNHH+
Sbjct: 45  PGGDFFGNHHI 55


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 77   LPVKSAFTNDLVHQNFEDD 133
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 77   LPVKSAFTNDLVHQNFEDD 133
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 77   LPVKSAFTNDLVHQNFEDD 133
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 77   LPVKSAFTNDLVHQNFEDD 133
            +P K  F N  V++ FE+D
Sbjct: 1514 IPAKDVFENGHVNKAFEED 1532


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 449 PGSICFGNHHL 481
           PG   FGNHH+
Sbjct: 45  PGGDFFGNHHI 55


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 449 PGSICFGNHHL 481
           PG   FGNHH+
Sbjct: 45  PGGDFFGNHHI 55


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 325 HDRSRRDVHLLTRHRCHNIRR 387
           H R  RD HL T  R H   R
Sbjct: 16  HKRFTRDHHLKTHMRLHTGER 36


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 360 CQKVHITPRTVVSGM 316
           CQK  ITP T  +G+
Sbjct: 34  CQKAPITPDTEATGL 48


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 325 HDRSRRDVHLLTRHRCHNIRR 387
           H R  RD HL T  R H   R
Sbjct: 169 HKRFTRDHHLKTHMRLHTGER 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,182
Number of Sequences: 336
Number of extensions: 2897
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)