Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I18
(863 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 34 0.77
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 34 0.77
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 34 0.77
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 34 0.77
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 34 0.77
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 34 0.77
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 34 0.77
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 34 0.77
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 34 0.77
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 34 0.77
Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II p... 32 2.3
U03643-1|AAA03571.1| 235|Homo sapiens leukophysin protein. 32 2.3
BC107881-1|AAI07882.1| 443|Homo sapiens DHX9 protein protein. 32 2.3
BC058896-1|AAH58896.1| 402|Homo sapiens DHX9 protein protein. 32 2.3
AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 32 2.3
AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 32 2.3
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 31 7.2
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1319 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1376
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1377 RGRGRGGRGASRGATRAKRAR 1397
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1319 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1376
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1377 RGRGRGGRGASRGATRAKRAR 1397
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1319 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1376
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1377 RGRGRGGRGASRGATRAKRAR 1397
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1319 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1376
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1377 RGRGRGGRGASRGATRAKRAR 1397
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1245 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1302
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1303 RGRGRGGRGASRGATRAKRAR 1323
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1478 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1535
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1536 RGRGRGGRGASRGATRAKRAR 1556
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1649 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1706
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1707 RGRGRGGRGASRGATRAKRAR 1727
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1649 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1706
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1707 RGRGRGGRGASRGATRAKRAR 1727
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1649 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1706
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1707 RGRGRGGRGASRGATRAKRAR 1727
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = -2
Query: 457 RTREGFQNRQYDGYQNRHANRTGGDGYYGN-GDVSEGAHHAXXXXXXXXXXXGFQGGYKG 281
R + + + +G +N TGG G +G G S G G GG +G
Sbjct: 1649 RPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGG--GGTRG 1706
Query: 280 RSRG-APRGATRGASRPPRAQ 221
R RG RGA+RGA+R RA+
Sbjct: 1707 RGRGRGGRGASRGATRAKRAR 1727
>Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II
protein.
Length = 1270
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 GYQNRHANRTGGD--GYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATR 248
GY+ ++ +GG G Y +G G + G GGY+G SRG RG +
Sbjct: 1172 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSG 1231
Query: 247 GASRPP 230
G R P
Sbjct: 1232 GDYRGP 1237
>U03643-1|AAA03571.1| 235|Homo sapiens leukophysin protein.
Length = 235
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 GYQNRHANRTGGD--GYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATR 248
GY+ ++ +GG G Y +G G + G GGY+G SRG RG +
Sbjct: 137 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSG 196
Query: 247 GASRPP 230
G R P
Sbjct: 197 GDYRGP 202
>BC107881-1|AAI07882.1| 443|Homo sapiens DHX9 protein protein.
Length = 443
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 GYQNRHANRTGGD--GYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATR 248
GY+ ++ +GG G Y +G G + G GGY+G SRG RG +
Sbjct: 345 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSG 404
Query: 247 GASRPP 230
G R P
Sbjct: 405 GDYRGP 410
>BC058896-1|AAH58896.1| 402|Homo sapiens DHX9 protein protein.
Length = 402
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 GYQNRHANRTGGD--GYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATR 248
GY+ ++ +GG G Y +G G + G GGY+G SRG RG +
Sbjct: 304 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSG 363
Query: 247 GASRPP 230
G R P
Sbjct: 364 GDYRGP 369
>AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 9 protein.
Length = 1270
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 GYQNRHANRTGGD--GYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATR 248
GY+ ++ +GG G Y +G G + G GGY+G SRG RG +
Sbjct: 1172 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSG 1231
Query: 247 GASRPP 230
G R P
Sbjct: 1232 GDYRGP 1237
>AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 9 protein.
Length = 1270
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 421 GYQNRHANRTGGD--GYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATR 248
GY+ ++ +GG G Y +G G + G GGY+G SRG RG +
Sbjct: 1172 GYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSG 1231
Query: 247 GASRPP 230
G R P
Sbjct: 1232 GDYRGP 1237
>AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA
sequence from clone RP11-223F20 on chromosome 13
Contains a novel heterogeneous nuclear ribonucleoprotein
family A protein and).
Length = 276
Score = 30.7 bits (66), Expect = 7.2
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -2
Query: 427 YDGYQNRHANRTGGDGYYGNGDVSEGAHHAXXXXXXXXXXXGFQGGYKGRSRGAPRGATR 248
YDGY N N GG Y G G+ ++ +H+ G G + GRS G+P G
Sbjct: 207 YDGY-NEGGN-FGGGNYGGGGNYNDFGNHSGQQQSNYGPMKG--GSFGGRSSGSPYGGGY 262
Query: 247 GA 242
G+
Sbjct: 263 GS 264
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,871,228
Number of Sequences: 237096
Number of extensions: 1871248
Number of successful extensions: 5345
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5307
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -