Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_I16
(791 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 301 5e-82
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 301 5e-82
SB_56| Best HMM Match : Actin (HMM E-Value=0) 301 5e-82
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 301 5e-82
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 299 1e-81
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 298 3e-81
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 256 1e-68
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 6e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 87 2e-17
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 5e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.007
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 35 0.087
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.5
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.3
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_46368| Best HMM Match : DUF156 (HMM E-Value=6.5) 29 5.7
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 7.5
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 10.0
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 10.0
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 28 10.0
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 301 bits (738), Expect = 5e-82
Identities = 141/153 (92%), Positives = 145/153 (94%)
Frame = -1
Query: 785 FXQEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 606
F QEM T ASS SLEK YELPD QVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 186 FEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 245
Query: 605 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 426
MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 246 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIG 305
Query: 425 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 327
GSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 306 GSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 301 bits (738), Expect = 5e-82
Identities = 141/153 (92%), Positives = 145/153 (94%)
Frame = -1
Query: 785 FXQEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 606
F QEM T ASS SLEK YELPD QVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 224 FEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 283
Query: 605 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 426
MKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIG
Sbjct: 284 MKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIG 343
Query: 425 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 327
GSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 344 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 301 bits (738), Expect = 5e-82
Identities = 141/153 (92%), Positives = 145/153 (94%)
Frame = -1
Query: 785 FXQEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 606
F QEM T ASS SLEK YELPD QVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 223 FEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 282
Query: 605 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 426
MKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIG
Sbjct: 283 MKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIG 342
Query: 425 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 327
GSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 301 bits (738), Expect = 5e-82
Identities = 141/153 (92%), Positives = 145/153 (94%)
Frame = -1
Query: 785 FXQEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 606
F QEM T ASS SLEK YELPD QVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 224 FEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 283
Query: 605 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 426
MKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 284 MKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIG 343
Query: 425 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 327
GSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 344 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 299 bits (735), Expect = 1e-81
Identities = 140/153 (91%), Positives = 146/153 (95%)
Frame = -1
Query: 785 FXQEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 606
F QEMAT A+S SLEK YELPD QVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSI
Sbjct: 223 FEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSI 282
Query: 605 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 426
MKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 283 MKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIG 342
Query: 425 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 327
GSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 298 bits (732), Expect = 3e-81
Identities = 139/153 (90%), Positives = 145/153 (94%)
Frame = -1
Query: 785 FXQEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 606
F QEM T ASS S+EK YELPD QVITIGNERFRCPEAL QPSFLGME+ GIHETTYNSI
Sbjct: 197 FEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSI 256
Query: 605 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 426
MKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIG
Sbjct: 257 MKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIG 316
Query: 425 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF 327
GSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 317 GSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 256 bits (627), Expect = 1e-68
Identities = 118/149 (79%), Positives = 131/149 (87%)
Frame = -1
Query: 773 MATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCD 594
M A+S LEK YELPD QVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCD
Sbjct: 1 MDIDANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCD 60
Query: 593 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 414
VDIRKDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSIL
Sbjct: 61 VDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSIL 120
Query: 413 ASLSTFQQMWISKQEYDESGPSIVHRKCF 327
ASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 121 ASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.3 bits (234), Expect = 6e-21
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 29/171 (16%)
Frame = -1
Query: 779 QEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMK 600
QE + L + Y LPD +V+ + ERF PEALFQP + +E G+ E +N+I
Sbjct: 229 QEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQA 288
Query: 599 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL---------------------APS 483
D+D R + Y + VLSGG+TMYPG+ R+++EI L P
Sbjct: 289 ADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPL 348
Query: 482 T-----MKIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 354
T K KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 349 TADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = -1
Query: 785 FXQEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSI 606
+ +E+ +S E Y LPD Q I IG+ERFR E LFQPS LG + GIHE+ + SI
Sbjct: 2268 YERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSI 2327
Query: 605 MKCDVDIRKDLYANTVLSG 549
KCD+D+R +L+ N VLSG
Sbjct: 2328 KKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.4 bits (202), Expect = 5e-17
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Frame = -1
Query: 710 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 534
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 533 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 402
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 401 TFQQMWISKQEYDESGPSIVHRKCF*THR 315
F + +K +YDE GPSI F HR
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -1
Query: 650 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 471
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 470 KII---APPERKYSVWIGGSILASL 405
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -1
Query: 614 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 459
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 458 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 360
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 611 SIMKCDVDIRKDLYANTVLSGGTTMYPG 528
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 34.7 bits (76), Expect = 0.087
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 779 QEMATXASSXSLEKXYELPDXQVITIGNERFRCPEALFQPSFL 651
+E+ ++ L K Y LPD Q+I+IG E E LF+P L
Sbjct: 856 KEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 680 PEALFQPSFLGMEACGIHET 621
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 418 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 591
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 592 TS 597
S
Sbjct: 815 AS 816
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 712 SSPSETKDSVAQRLSSNPRSWVWK 641
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 445 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 326
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 403 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 293
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_46368| Best HMM Match : DUF156 (HMM E-Value=6.5)
Length = 203
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 708 HHRKRKIPLPRGSLPTLVLGYGSLRHPRDH 619
HHRKR LPR ++ + G GS PRD+
Sbjct: 58 HHRKRSRSLPRTNVFGTLNGLGSPPPPRDN 87
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 566 NTVLSGGTTMYPGIADRMQKEITALAP 486
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 400 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 281
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 427 VDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSA-SKRTA 314
VD+S P SLP+ K G + S P GS+ SK TA
Sbjct: 1939 VDKSEPGSLPTVKFGVTTTADASSMPKFQFGSSGSKDTA 1977
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 712 SSPSETKDSVAQRLSSNPRSWVWK 641
S+ SETK SV +R + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 712 SSPSETKDSVAQRLSSNPRSWVWK 641
S+ SETK SV +R + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 712 SSPSETKDSVAQRLSSNPRSWVWK 641
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,429,466
Number of Sequences: 59808
Number of extensions: 507529
Number of successful extensions: 1665
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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