Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_I14
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.9  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 243 RPGSPALRGRQGHILGDHGVGRR 175
           R  +P++ G  GH +   GVG R
Sbjct: 31  RNSAPSICGEHGHCVNLPGVGHR 53


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 250 TCTSWVSSPSRAARTYPWRSRC 185
           TCT   S+ SR   TYP    C
Sbjct: 40  TCTRISSTVSRNTDTYPTLETC 61


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 498 DDRSARAPLHHEQPSASGLTHQRGIPPR 415
           DD   R P H  +   +     RGI PR
Sbjct: 252 DDHRDRPPRHFHEEHDTRRASSRGIIPR 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,408
Number of Sequences: 336
Number of extensions: 2477
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)